Statistics - iRefWeb - Wodak Lab

By Database
By Organism
Annotation Overlaps
MI (MINT-Inspired) Score Distributions
Source DB Releases Used

Database	Release Date	Release Label
bind	2005 May 25	bind_05/05/25
bind_translation	2010 Dec 15
biogrid	2011 Oct 01	3.1.81
corum	2009 Dec 02
dip	2010 Oct 10
hprd	2010 Apr 13	Release 9
innatedb	2011 Mar 06
intact	2011 Sep 29
matrixdb	2010 Aug 26
mint	2010 Dec 21
mpact	2008 Jan 10
mpiimex	2011 Oct 03
mpilit	2011 Oct 03
mppi	2004 Jun 01
ophid	2006 Jul 07

physical or genetic interactions
physical interactions only

unique annotations grouped/stacked with non-unique annotations
unique annotations as separate bars from non-unique annotations
log scale.

A "unique" annotation means only one database recorded it.

Interactions

Proteins/Genes

PubMeds

Show annotations involving physical or genetic interactions
Show annotations involving physical interactions only.

Interactions

Proteins/Genes

PubMeds

Hover your mouse over cells to highlight the details of the overlap.
Annotation Overlap Counts
Annotation Overlap Percent (cell count as percentage of that row's database total annotations)

Interactions

	bind	bind_translation	biogrid	corum	dip	hprd	innatedb	intact	matrixdb	mint	mpact	mpiimex	mpilit	mppi	ophid
bind	62,514 100%	55,778 89%	31,887 51%	373 <1%	31,235 50%	2,599 4%	482 <1%	31,858 51%	5 <1%	29,225 47%	6,492 10%	13 <1%	46 <1%	513 <1%	3,204 5%
bind_translation	55,778 93%	59,818 100%	31,944 53%	265 <1%	30,176 50%	2,943 5%	545 <1%	31,076 52%	5 <1%	29,072 49%	6,293 11%	11 <1%	45 <1%	480 <1%	3,568 6%
biogrid	31,887 11%	31,944 12%	277,504 100%	292 <1%	43,866 16%	12,217 4%	1,850 <1%	46,464 17%	16 <1%	47,566 17%	8,531 3%	0 0%	1 <1%	243 <1%	13,642 5%
corum	373 14%	265 10%	292 11%	2,607 100%	129 5%	299 11%	83 3%	249 10%	0 0%	121 5%	0 0%	0 0%	0 0%	16 <1%	238 9%
dip	31,235 35%	30,176 34%	43,866 49%	129 <1%	89,456 100%	1,314 1%	442 <1%	43,872 49%	3 <1%	43,346 48%	7,039 8%	26 <1%	93 <1%	68 <1%	1,586 2%
hprd	2,599 6%	2,943 7%	12,217 30%	299 <1%	1,314 3%	40,487 100%	1,147 3%	6,766 17%	14 <1%	5,436 13%	0 0%	0 0%	0 0%	175 <1%	12,012 30%
innatedb	482 7%	545 8%	1,850 26%	83 1%	442 6%	1,147 16%	7,000 100%	822 12%	5 <1%	663 9%	0 0%	0 0%	0 0%	52 <1%	1,236 18%
intact	31,858 20%	31,076 20%	46,464 30%	249 <1%	43,872 28%	6,766 4%	822 <1%	156,120 100%	15 <1%	47,857 31%	6,231 4%	34 <1%	114 <1%	99 <1%	7,707 5%
matrixdb	5 2%	5 2%	16 8%	0 0%	3 1%	14 7%	5 2%	15 7%	201 100%	3 1%	0 0%	0 0%	0 0%	2 <1%	24 12%
mint	29,225 34%	29,072 34%	47,566 56%	121 <1%	43,346 51%	5,436 6%	663 <1%	47,857 56%	3 <1%	85,641 100%	6,480 8%	14 <1%	32 <1%	94 <1%	7,253 8%
mpact	6,492 49%	6,293 47%	8,531 64%	0 0%	7,039 53%	0 0%	0 0%	6,231 47%	0 0%	6,480 49%	13,331 100%	0 0%	0 0%	0 0%	0 0%
mpiimex	13 3%	11 2%	0 0%	0 0%	26 5%	0 0%	0 0%	34 7%	0 0%	14 3%	0 0%	473 100%	30 6%	0 0%	0 0%
mpilit	46 6%	45 6%	1 <1%	0 0%	93 12%	0 0%	0 0%	114 15%	0 0%	32 4%	0 0%	30 4%	745 100%	0 0%	0 0%
mppi	513 62%	480 58%	243 29%	16 2%	68 8%	175 21%	52 6%	99 12%	2 <1%	94 11%	0 0%	0 0%	0 0%	830 100%	189 23%
ophid	3,204 7%	3,568 8%	13,642 29%	238 <1%	1,586 3%	12,012 25%	1,236 3%	7,707 16%	24 <1%	7,253 15%	0 0%	0 0%	0 0%	189 <1%	47,393 100%

Proteins

	bind	bind_translation	biogrid	corum	dip	hprd	innatedb	intact	matrixdb	mint	mpact	mpiimex	mpilit	mppi	ophid
bind	34,734 100%	29,990 86%	19,183 55%	2,317 7%	18,427 53%	3,132 9%	1,750 5%	20,380 59%	90 <1%	18,602 54%	4,382 13%	75 <1%	200 <1%	754 2%	3,564 10%
bind_translation	29,990 95%	31,666 100%	18,573 59%	2,186 7%	17,372 55%	3,177 10%	1,763 6%	19,205 61%	89 <1%	17,632 56%	3,950 12%	43 <1%	127 <1%	724 2%	3,513 11%
biogrid	19,183 56%	18,573 54%	34,385 100%	2,914 8%	20,010 58%	6,999 20%	2,497 7%	26,053 76%	102 <1%	20,357 59%	4,611 13%	1 <1%	6 <1%	607 2%	7,151 21%
corum	2,317 53%	2,186 50%	2,914 67%	4,359 100%	2,311 53%	2,002 46%	1,086 25%	3,220 74%	42 <1%	2,426 56%	0 0%	0 0%	0 0%	409 9%	2,250 52%
dip	18,427 62%	17,372 59%	20,010 68%	2,311 8%	29,584 100%	3,877 13%	1,804 6%	25,082 85%	66 <1%	21,024 71%	4,718 16%	116 <1%	349 1%	491 2%	4,368 15%
hprd	3,132 32%	3,177 32%	6,999 71%	2,002 20%	3,877 39%	9,823 100%	1,773 18%	6,465 66%	88 <1%	4,778 49%	0 0%	0 0%	0 0%	330 3%	6,768 69%
innatedb	1,750 54%	1,763 55%	2,497 77%	1,086 34%	1,804 56%	1,773 55%	3,230 100%	2,463 76%	61 2%	2,021 63%	0 0%	0 0%	0 0%	341 11%	2,032 63%
intact	20,380 40%	19,205 37%	26,053 51%	3,220 6%	25,082 49%	6,465 13%	2,463 5%	51,432 100%	96 <1%	25,206 49%	4,911 10%	129 <1%	442 <1%	623 1%	6,936 13%
matrixdb	90 60%	89 59%	102 68%	42 28%	66 44%	88 58%	61 40%	96 64%	151 100%	86 57%	0 0%	0 0%	0 0%	14 9%	105 70%
mint	18,602 60%	17,632 57%	20,357 66%	2,426 8%	21,024 68%	4,778 15%	2,021 7%	25,206 81%	86 <1%	30,957 100%	4,777 15%	65 <1%	228 <1%	557 2%	5,243 17%
mpact	4,382 88%	3,950 80%	4,611 93%	0 0%	4,718 95%	0 0%	0 0%	4,911 99%	0 0%	4,777 96%	4,954 100%	0 0%	0 0%	0 0%	1 <1%
mpiimex	75 16%	43 9%	1 <1%	0 0%	116 25%	0 0%	0 0%	129 27%	0 0%	65 14%	0 0%	473 100%	92 19%	0 0%	0 0%
mpilit	200 21%	127 14%	6 <1%	0 0%	349 37%	0 0%	0 0%	442 47%	0 0%	228 24%	0 0%	92 10%	937 100%	0 0%	0 0%
mppi	754 89%	724 86%	607 72%	409 48%	491 58%	330 39%	341 40%	623 74%	14 2%	557 66%	0 0%	0 0%	0 0%	845 100%	424 50%
ophid	3,564 38%	3,513 37%	7,151 76%	2,250 24%	4,368 46%	6,768 71%	2,032 21%	6,936 73%	105 1%	5,243 55%	1 <1%	0 0%	0 0%	424 4%	9,467 100%

PubMeds

	bind	bind_translation	biogrid	corum	dip	hprd	innatedb	intact	matrixdb	mint	mpact	mpiimex	mpilit	mppi	ophid
bind	15,037 100%	10,810 72%	2,732 18%	499 3%	995 7%	2,863 19%	179 1%	1,084 7%	1 <1%	658 4%	544 4%	2 <1%	41 <1%	356 2%	548 4%
bind_translation	10,810 91%	11,926 100%	2,565 22%	454 4%	910 8%	2,604 22%	186 2%	989 8%	1 <1%	560 5%	533 4%	2 <1%	39 <1%	313 3%	508 4%
biogrid	2,732 10%	2,565 9%	28,260 100%	621 2%	1,675 6%	9,569 34%	689 2%	1,881 7%	7 <1%	1,008 4%	828 3%	0 0%	0 0%	148 <1%	3,505 12%
corum	499 28%	454 26%	621 35%	1,756 100%	30 2%	924 53%	85 5%	151 9%	0 0%	72 4%	2 <1%	0 0%	0 0%	16 <1%	273 16%
dip	995 20%	910 18%	1,675 34%	30 <1%	4,958 100%	454 9%	69 1%	510 10%	0 0%	320 6%	511 10%	12 <1%	141 3%	7 <1%	135 3%
hprd	2,863 14%	2,604 13%	9,569 47%	924 5%	454 2%	20,465 100%	1,032 5%	1,375 7%	18 <1%	1,580 8%	12 <1%	0 0%	0 0%	232 1%	4,739 23%
innatedb	179 6%	186 6%	689 23%	85 3%	69 2%	1,032 34%	3,037 100%	141 5%	7 <1%	131 4%	0 0%	0 0%	0 0%	8 <1%	264 9%
intact	1,084 22%	989 20%	1,881 38%	151 3%	510 10%	1,375 27%	141 3%	5,005 100%	1 <1%	300 6%	95 2%	7 <1%	69 1%	22 <1%	248 5%
matrixdb	1 1%	1 1%	7 10%	0 0%	0 0%	18 26%	7 10%	1 1%	68 100%	0 0%	0 0%	0 0%	0 0%	1 1%	8 12%
mint	658 16%	560 14%	1,008 25%	72 2%	320 8%	1,580 40%	131 3%	300 8%	0 0%	3,992 100%	29 <1%	0 0%	8 <1%	20 <1%	410 10%
mpact	544 57%	533 56%	828 87%	2 <1%	511 54%	12 1%	0 0%	95 10%	0 0%	29 3%	947 100%	0 0%	0 0%	1 <1%	5 <1%
mpiimex	2 <1%	2 <1%	0 0%	0 0%	12 6%	0 0%	0 0%	7 3%	0 0%	0 0%	0 0%	215 100%	72 33%	0 0%	0 0%
mpilit	41 5%	39 5%	0 0%	0 0%	141 17%	0 0%	0 0%	69 8%	0 0%	8 <1%	0 0%	72 9%	838 100%	0 0%	0 0%
mppi	356 100%	313 88%	148 41%	16 4%	7 2%	232 65%	8 2%	22 6%	1 <1%	20 6%	1 <1%	0 0%	0 0%	357 100%	70 20%
ophid	548 11%	508 11%	3,505 73%	273 6%	135 3%	4,739 98%	264 5%	248 5%	8 <1%	410 8%	5 <1%	0 0%	0 0%	70 1%	4,832 100%

Log Scale

Arabidopsis thaliana
Oryza sativa
Schizosaccharomyces pombe
Saccharomyces cerevisiae
Caenorhabditis elegans
Drosophila melanogaster
Homo sapiens
Bos taurus
Mus musculus
Rattus norvegicus
Oryza sativa Indica Group
Oryza sativa Japonica Group
Schizosaccharomyces pombe 972h-
Saccharomyces cerevisiae YJM789
Saccharomyces cerevisiae S288c

Arabidopsis thaliana

Oryza sativa

Schizosaccharomyces pombe

Saccharomyces cerevisiae

Caenorhabditis elegans

Drosophila melanogaster

Homo sapiens

Bos taurus

Mus musculus

Rattus norvegicus

Oryza sativa Indica Group

Oryza sativa Japonica Group

Schizosaccharomyces pombe 972h-

Saccharomyces cerevisiae YJM789

Saccharomyces cerevisiae S288c

iRefWeb 4.1

In collaboration with Ian Donaldson — using iRefIndex Version 9.0
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