Search - CYC2008 - Wodak Lab

1,3-beta-glucan synthase complex (Fks1p/Rho1p) Size 2

Enriched GO Terms
GO ID GO Term GO Size GO Type Common Fraction Probability E-Value
GO:0000148 1,3-beta-glucan synthase complex 3 c 2 1 1.51E-7 2.97E-2
GO:0005624 membrane fraction 87 c 2 1 1.88E-4 3.71E1
GO:0005739 mitochondrion 1028 c 2 1 2.65E-2 5.23E3
GO:0006897 endocytosis 76 p 2 1 1.43E-4 8.81E1
GO:0008361 regulation of cell size 30 p 2 1 2.19E-5 1.35E1
Evidence
ORF Gene Method Pubmed ID
YLR342W FKS1 Co-purification 8602515
YPR165W RHO1 Co-purification 8602515

1,3-beta-glucan synthase complex (Gsc2p/Smk1p) Size 2

Enriched GO Terms
GO ID GO Term GO Size GO Type Common Fraction Probability E-Value
GO:0030476 ascospore wall assembly 43 p 2 1 4.54E-5 2.79E1
Evidence
ORF Gene Method Pubmed ID
YGR032W GSC2 Affinity Capture-Western 16116083
YPR054W SMK1 Affinity Capture-Western 16116083

19/22S regulator Size 22

Enriched GO Terms
GO ID GO Term GO Size GO Type Common Fraction Probability E-Value
GO:0008540 proteasome regulatory particle, base subcomplex 9 c 9 0.41 1.15E-23 2.26E-18
GO:0008541 proteasome regulatory particle, lid subcomplex 10 c 10 0.45 2.37E-26 4.67E-21
GO:0034515 proteasome storage granule 21 c 11 0.5 1.57E-23 3.09E-18
GO:0006511 ubiquitin-dependent protein catabolic process 65 p 19 0.86 1.47E-36 9.06E-31
Evidence
ORF Gene Method Pubmed ID
YDL007W RPT2 Affinity Capture-MS 15117943
YDL007W RPT2 Affinity Capture-Western 15117943
YDL097C RPN6 Affinity Capture-MS 15117943
YDL097C RPN6 Affinity Capture-Western 15117943
YDL147W RPN5 Affinity Capture-MS 15117943
YDL147W RPN5 Affinity Capture-Western 15117943
YDR363W-A SEM1 Affinity Capture-MS 15117943
YDR363W-A SEM1 Affinity Capture-Western 15117943
YDR394W RPT3 Affinity Capture-MS 15117943
YDR394W RPT3 Affinity Capture-Western 15117943
YDR427W RPN9 Affinity Capture-MS 15117943
YDR427W RPN9 Affinity Capture-Western 15117943
YER021W RPN3 Affinity Capture-MS 15117943
YER021W RPN3 Affinity Capture-Western 15117943
YFR004W RPN11 Affinity Capture-MS 15117943
YFR004W RPN11 Affinity Capture-Western 15117943
YFR010W UBP6 Affinity Capture-MS 15117943
YFR010W UBP6 Affinity Capture-Western 15117943
YFR052W RPN12 Affinity Capture-MS 15117943
YFR052W RPN12 Affinity Capture-Western 15117943
YGL048C RPT6 Affinity Capture-MS 15117943
YGL048C RPT6 Affinity Capture-Western 15117943
YGR232W NAS6 Affinity Capture-MS 15117943
YGR232W NAS6 Affinity Capture-Western 15117943
YHL030W ECM29 Affinity Capture-MS 15117943
YHL030W ECM29 Affinity Capture-Western 15117943
YHR027C RPN1 Affinity Capture-MS 15117943
YHR027C RPN1 Affinity Capture-Western 15117943
YHR200W RPN10 Affinity Capture-MS 15117943
YHR200W RPN10 Affinity Capture-Western 15117943
YIL075C RPN2 Affinity Capture-MS 15117943
YIL075C RPN2 Affinity Capture-Western 15117943
YKL145W RPT1 Affinity Capture-MS 15117943
YKL145W RPT1 Affinity Capture-Western 15117943
YLR421C RPN13 Affinity Capture-MS 15117943
YLR421C RPN13 Affinity Capture-Western 15117943
YOR117W RPT5 Affinity Capture-MS 15117943
YOR117W RPT5 Affinity Capture-Western 15117943
YOR259C RPT4 Affinity Capture-MS 15117943
YOR259C RPT4 Affinity Capture-Western 15117943
YOR261C RPN8 Affinity Capture-MS 15117943
YOR261C RPN8 Affinity Capture-Western 15117943
YPR108W RPN7 Affinity Capture-MS 15117943
YPR108W RPN7 Affinity Capture-Western 15117943

20S proteasome Size 14

Enriched GO Terms
GO ID GO Term GO Size GO Type Common Fraction Probability E-Value
GO:0019773 proteasome core complex, alpha-subunit complex 7 c 7 0.5 4.37E-20 8.61E-15
GO:0019774 proteasome core complex, beta-subunit complex 7 c 7 0.5 4.37E-20 8.61E-15
GO:0034515 proteasome storage granule 21 c 10 0.71 1.29E-23 2.53E-18
GO:0006511 ubiquitin-dependent protein catabolic process 65 p 14 1 3.42E-29 2.1E-23
Evidence
ORF Gene Method Pubmed ID
YBL041W PRE7 Co-crystal Structure 9087403
YER012W PRE1 Co-crystal Structure 9087403
YER094C PUP3 Co-crystal Structure 9087403
YFR050C PRE4 Co-crystal Structure 9087403
YGL011C SCL1 Co-crystal Structure 9087403
YGR135W PRE9 Co-crystal Structure 9087403
YGR253C PUP2 Co-crystal Structure 9087403
YJL001W PRE3 Co-crystal Structure 9087403
YML092C PRE8 Co-crystal Structure 9087403
YMR314W PRE5 Co-crystal Structure 9087403
YOL038W PRE6 Co-crystal Structure 9087403
YOR157C PUP1 Co-crystal Structure 9087403
YOR362C PRE10 Co-crystal Structure 9087403
YPR103W PRE2 Co-crystal Structure 9087403

6-phosphofructokinase complex Size 2

Enriched GO Terms
GO ID GO Term GO Size GO Type Common Fraction Probability E-Value
GO:0005737 cytoplasm 1327 c 2 1 4.42E-2 8.72E3
GO:0005739 mitochondrion 1028 c 2 1 2.65E-2 5.23E3
GO:0005945 6-phosphofructokinase complex 2 c 2 1 5.03E-8 9.91E-3
GO:0006096 glycolysis 16 p 2 1 6.03E-6 3.71E0
Evidence
ORF Gene Method Pubmed ID
YGR240C PFK1 Reconstituted Complex 9559541
YMR205C PFK2 Reconstituted Complex 9559541

acetolactate synthase complex Size 2

Enriched GO Terms
GO ID GO Term GO Size GO Type Common Fraction Probability E-Value
GO:0005739 mitochondrion 1028 c 2 1 2.65E-2 5.23E3
GO:0005948 acetolactate synthase complex 2 c 2 1 5.03E-8 9.91E-3
GO:0009082 branched chain family amino acid biosynthetic process 7 p 2 1 1.06E-6 6.5E-1
Evidence
ORF Gene Method Pubmed ID
YCL009C ILV6 Reconstituted Complex 10213630
YMR108W ILV2 Reconstituted Complex 10213630

actin cytoskeleton-regulatory complex, Pan1p/Sla1p/End3p complex Size 3

Enriched GO Terms
GO ID GO Term GO Size GO Type Common Fraction Probability E-Value
GO:0000147 actin cortical patch assembly 12 p 3 1 5.26E-9 3.24E-3
GO:0006897 endocytosis 76 p 3 1 1.68E-6 1.03E0
GO:0007121 bipolar cellular bud site selection 33 p 3 1 1.3E-7 8.03E-2
Evidence
ORF Gene Method Pubmed ID
YBL007C SLA1 Affinity Capture-Western 10594004
YBL007C SLA1 Two-hybrid 10594004
YIR006C PAN1 Affinity Capture-Western 10594004
YIR006C PAN1 Two-hybrid 10594004
YNL084C END3 Affinity Capture-Western 10594004
YNL084C END3 Two-hybrid 10594004

Ada2p/Gcn5p/Ada3 transcription activator complex Size 5

Enriched GO Terms
GO ID GO Term GO Size GO Type Common Fraction Probability E-Value
GO:0000124 SAGA complex 20 c 4 0.8 3.67E-10 7.23E-5
GO:0005671 Ada2/Gcn5/Ada3 transcription activator complex 5 c 5 1 1.2E-17 2.37E-12
GO:0046695 SLIK (SAGA-like) complex 17 c 4 0.8 1.8E-10 3.55E-5
GO:0016568 chromatin modification 20 p 4 0.8 3.67E-10 2.26E-4
GO:0016573 histone acetylation 41 p 5 1 9.02E-12 5.55E-6
Evidence
ORF Gene Method Pubmed ID
YDR176W NGG1 Co-purification 10490601
YDR176W NGG1 Reconstituted Complex 10490601
YDR448W ADA2 Co-purification 10490601
YDR448W ADA2 Reconstituted Complex 10490601
YGR252W GCN5 Co-purification 10490601
YGR252W GCN5 Reconstituted Complex 10490601
YOR023C AHC1 Co-purification 10490601
YOR023C AHC1 Reconstituted Complex 10490601
YPL254W HFI1 Co-purification 10490601
YPL254W HFI1 Reconstituted Complex 10490601

adenylyl cyclase complex Size 2

Enriched GO Terms
GO ID GO Term GO Size GO Type Common Fraction Probability E-Value
GO:0007265 Ras protein signal transduction 15 p 2 1 5.28E-6 3.25E0
Evidence
ORF Gene Method Pubmed ID
YJL005W CYR1 Affinity Capture-Western 2455217
YNL138W SRV2 Affinity Capture-Western 2455217

adoMet-dependent tRNA methyltransferase (Mtase) Complex Size 2

Enriched GO Terms
GO ID GO Term GO Size GO Type Common Fraction Probability E-Value
GO:0005737 cytoplasm 1327 c 2 1 4.42E-2 8.72E3
GO:0030488 tRNA methylation 18 p 2 1 7.69E-6 4.73E0
Evidence
ORF Gene Method Pubmed ID
YNR046W TRM112 Affinity Capture-Western 15899842
YOL124C TRM11 Affinity Capture-Western 15899842

alpha DNA polymerase:primase complex Size 4

Enriched GO Terms
GO ID GO Term GO Size GO Type Common Fraction Probability E-Value
GO:0005658 alpha DNA polymerase:primase complex 4 c 4 1 1.52E-14 2.99E-9
GO:0006270 DNA replication initiation 26 p 4 1 2.27E-10 1.4E-4
GO:0006273 lagging strand elongation 16 p 4 1 2.76E-11 1.7E-5
Evidence
ORF Gene Method Pubmed ID
YBL035C POL12 Co-purification 3888995
YIR008C PRI1 Co-purification 3888995
YKL045W PRI2 Co-purification 3888995
YNL102W POL1 Co-purification 3888995

alpha,alpha-trehalose-phosphate synthase complex (UDP-forming) Size 4

Enriched GO Terms
GO ID GO Term GO Size GO Type Common Fraction Probability E-Value
GO:0005946 alpha,alpha-trehalose-phosphate synthase complex (UDP-forming) 4 c 4 1 1.52E-14 2.99E-9
GO:0005992 trehalose biosynthetic process 7 p 4 1 5.31E-13 3.27E-7
GO:0006950 response to stress 68 p 4 1 1.24E-8 7.6E-3
Evidence
ORF Gene Method Pubmed ID
YBR126C TPS1 Two-hybrid 9194697
YDR074W TPS2 Two-hybrid 9194697
YML100W TSL1 Two-hybrid 9194697
YMR261C TPS3 Two-hybrid 9194697

alpha-1,6-mannosyltransferase complex(Anp1p/Mnn9p) Size 5

Enriched GO Terms
GO ID GO Term GO Size GO Type Common Fraction Probability E-Value
GO:0000136 alpha-1,6-mannosyltransferase complex 6 c 5 1 7.22E-17 1.42E-11
Evidence
ORF Gene Method Pubmed ID
YDR245W MNN10 Affinity Capture-Western 9430634
YEL036C ANP1 Affinity Capture-Western 9430634
YJL183W MNN11 Affinity Capture-Western 9430634
YJR075W HOC1 Affinity Capture-Western 9430634
YPL050C MNN9 Affinity Capture-Western 9430634

alpha-1,6-mannosyltransferase complex(Van1p/Mnn9p) Size 2

Enriched GO Terms
GO ID GO Term GO Size GO Type Common Fraction Probability E-Value
GO:0000136 alpha-1,6-mannosyltransferase complex 6 c 2 1 7.54E-7 1.49E-1
GO:0006487 protein amino acid N-linked glycosylation 34 p 2 1 2.82E-5 1.74E1
Evidence
ORF Gene Method Pubmed ID
YML115C VAN1 Affinity Capture-Western 12235155
YPL050C MNN9 Affinity Capture-Western 12235155

anaphase-promoting complex Size 15

Enriched GO Terms
GO ID GO Term GO Size GO Type Common Fraction Probability E-Value
GO:0005680 anaphase-promoting complex 16 c 15 1 2.14E-44 4.21E-39
GO:0000022 mitotic spindle elongation 20 p 13 0.87 2.05E-33 1.26E-27
GO:0000070 mitotic sister chromatid segregation 38 p 14 0.93 8.09E-32 4.98E-26
GO:0007091 mitotic metaphase/anaphase transition 13 p 13 0.87 2.64E-38 1.63E-32
GO:0008054 cyclin catabolic process 12 p 12 0.8 5.55E-35 3.41E-29
GO:0016567 protein ubiquitination 41 p 13 0.87 4.62E-28 2.84E-22
GO:0031145 anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process 13 p 13 0.87 2.64E-38 1.63E-32
Evidence
ORF Gene Method Pubmed ID
YBL084C CDC27 Affinity Capture-MS 9469814
YDL008W APC11 Affinity Capture-MS 9469814
YDR118W APC4 Affinity Capture-MS 9469814
YDR260C SWM1 Affinity Capture-MS 9469814
YFR036W CDC26 Affinity Capture-MS 9469814
YGL003C CDH1 Affinity Capture-MS 9469814
YGL116W CDC20 Affinity Capture-MS 9469814
YGL240W DOC1 Affinity Capture-MS 9469814
YHR166C CDC23 Affinity Capture-MS 9469814
YIR025W MND2 Affinity Capture-MS 9469814
YKL022C CDC16 Affinity Capture-MS 9469814
YLR102C APC9 Affinity Capture-MS 9469814
YLR127C APC2 Affinity Capture-MS 9469814
YNL172W APC1 Affinity Capture-MS 9469814
YOR249C APC5 Affinity Capture-MS 9469814

anthranilate synthase complex Size 2

Enriched GO Terms
GO ID GO Term GO Size GO Type Common Fraction Probability E-Value
GO:0005737 cytoplasm 1327 c 2 1 4.42E-2 8.72E3
GO:0005950 anthranilate synthase complex 2 c 2 1 5.03E-8 9.91E-3
GO:0000162 tryptophan biosynthetic process 5 p 2 1 5.03E-7 3.09E-1
Evidence
ORF Gene Method Pubmed ID
YER090W TRP2 Co-purification 3881257
YKL211C TRP3 Co-purification 3881257

AP-1 adaptor complex Size 5

Enriched GO Terms
GO ID GO Term GO Size GO Type Common Fraction Probability E-Value
GO:0030121 AP-1 adaptor complex 5 c 5 1 1.2E-17 2.37E-12
GO:0006896 Golgi to vacuole transport 23 p 5 1 4.05E-13 2.49E-7
GO:0016192 vesicle-mediated transport 52 p 5 1 3.13E-11 1.92E-5
Evidence
ORF Gene Method Pubmed ID
YHL019C APM2 Affinity Capture-Western 10564262
YKL135C APL2 Affinity Capture-Western 10564262
YLR170C APS1 Affinity Capture-Western 10564262
YPL259C APM1 Affinity Capture-Western 10564262
YPR029C APL4 Affinity Capture-Western 10564262

AP-2 adaptor complex Size 4

Enriched GO Terms
GO ID GO Term GO Size GO Type Common Fraction Probability E-Value
GO:0030122 AP-2 adaptor complex 4 c 4 1 1.52E-14 2.99E-9
GO:0016192 vesicle-mediated transport 52 p 4 1 4.11E-9 2.53E-3
Evidence
ORF Gene Method Pubmed ID
YBL037W APL3 Affinity Capture-Western 10564262
YJR005W APL1 Affinity Capture-Western 10564262
YJR058C APS2 Affinity Capture-Western 10564262
YOL062C APM4 Affinity Capture-Western 10564262

AP-3 adaptor complex Size 4

Enriched GO Terms
GO ID GO Term GO Size GO Type Common Fraction Probability E-Value
GO:0030123 AP-3 adaptor complex 4 c 4 1 1.52E-14 2.99E-9
GO:0006896 Golgi to vacuole transport 23 p 4 1 1.34E-10 8.27E-5
GO:0016192 vesicle-mediated transport 52 p 4 1 4.11E-9 2.53E-3
Evidence
ORF Gene Method Pubmed ID
YBR288C APM3 Co-purification 9335339
YGR261C APL6 Co-purification 9335339
YJL024C APS3 Co-purification 9335339
YPL195W APL5 Co-purification 9335339

Apg12p/Apg5p/Apg16 multimeric complex Size 3

Enriched GO Terms
GO ID GO Term GO Size GO Type Common Fraction Probability E-Value
GO:0034274 Atg12-Atg5-Atg16 complex 3 c 3 1 2.39E-11 4.71E-6
GO:0016236 macroautophagy 14 p 3 1 8.71E-9 5.36E-3
GO:0034727 piecemeal microautophagy of nucleus 33 p 3 1 1.3E-7 8.03E-2
Evidence
ORF Gene Method Pubmed ID
YBR217W ATG12 Co-purification 11897782
YMR159C ATG16 Co-purification 11897782
YPL149W ATG5 Co-purification 11897782