1,3-beta-glucan synthase complex (Fks1p/Rho1p) Co-purification YPR165W RHO1 protein protein YLR342W FKS1 protein protein 1,3-beta-glucan synthase complex (Gsc2p/Smk1p) Affinity Capture-Western YPR054W SMK1 protein protein YGR032W GSC2 protein protein 19/22S regulator Affinity Capture-MS Affinity Capture-Western YDR363W-A SEM1 protein protein YGR232W NAS6 protein protein YHR200W RPN10 protein protein YGL048C RPT6 protein protein YLR421C RPN13 protein protein YDL007W RPT2 protein protein YDR427W RPN9 protein protein YOR261C RPN8 protein protein YDR394W RPT3 protein protein YFR010W UBP6 protein protein YOR259C RPT4 protein protein YFR004W RPN11 protein protein YOR117W RPT5 protein protein YFR052W RPN12 protein protein YKL145W RPT1 protein protein YHR027C RPN1 protein protein YER021W RPN3 protein protein YIL075C RPN2 protein protein YDL147W RPN5 protein protein YPR108W RPN7 protein protein YHL030W ECM29 protein protein YDL097C RPN6 protein protein 20S proteasome Co-crystal Structure YER012W PRE1 protein protein YPR103W PRE2 protein protein YER094C PUP3 protein protein YOR157C PUP1 protein protein YGR135W PRE9 protein protein YGR253C PUP2 protein protein YOR362C PRE10 protein protein YGL011C SCL1 protein protein YML092C PRE8 protein protein YBL041W PRE7 protein protein YOL038W PRE6 protein protein YMR314W PRE5 protein protein YFR050C PRE4 protein protein YJL001W PRE3 protein protein 6-phosphofructokinase complex Reconstituted Complex YMR205C PFK2 protein protein YGR240C PFK1 protein protein acetolactate synthase complex Reconstituted Complex YMR108W ILV2 protein protein YCL009C ILV6 protein protein actin cytoskeleton-regulatory complex, Pan1p/Sla1p/End3p complex Affinity Capture-Western Two-hybrid YIR006C PAN1 protein protein YBL007C SLA1 protein protein YNL084C END3 protein protein Ada2p/Gcn5p/Ada3 transcription activator complex Co-purification Reconstituted Complex YPL254W HFI1 protein protein YDR448W ADA2 protein protein YOR023C AHC1 protein protein YDR176W NGG1 protein protein YGR252W GCN5 protein protein adenylyl cyclase complex Affinity Capture-Western YNL138W SRV2 protein protein YJL005W CYR1 protein protein adoMet-dependent tRNA methyltransferase (Mtase) Complex Affinity Capture-Western YOL124C TRM11 protein protein YNR046W TRM112 protein protein alpha DNA polymerase:primase complex Co-purification YBL035C POL12 protein protein YNL102W POL1 protein protein YKL045W PRI2 protein protein YIR008C PRI1 protein protein alpha,alpha-trehalose-phosphate synthase complex (UDP-forming) Two-hybrid YML100W TSL1 protein protein YMR261C TPS3 protein protein YDR074W TPS2 protein protein YBR126C TPS1 protein protein alpha-1,6-mannosyltransferase complex(Anp1p/Mnn9p) Affinity Capture-Western YJL183W MNN11 protein protein YEL036C ANP1 protein protein YDR245W MNN10 protein protein YPL050C MNN9 protein protein YJR075W HOC1 protein protein alpha-1,6-mannosyltransferase complex(Van1p/Mnn9p) Affinity Capture-Western YPL050C MNN9 protein protein YML115C VAN1 protein protein anaphase-promoting complex Affinity Capture-MS YDR260C SWM1 protein protein YLR127C APC2 protein protein YNL172W APC1 protein protein YDL008W APC11 protein protein YIR025W MND2 protein protein YHR166C CDC23 protein protein YGL003C CDH1 protein protein YGL116W CDC20 protein protein YGL240W DOC1 protein protein YKL022C CDC16 protein protein YFR036W CDC26 protein protein YBL084C CDC27 protein protein YLR102C APC9 protein protein YOR249C APC5 protein protein YDR118W APC4 protein protein anthranilate synthase complex Co-purification YER090W TRP2 protein protein YKL211C TRP3 protein protein AP-1 adaptor complex Affinity Capture-Western YLR170C APS1 protein protein YHL019C APM2 protein protein YPR029C APL4 protein protein YKL135C APL2 protein protein YPL259C APM1 protein protein AP-2 adaptor complex Affinity Capture-Western YJR058C APS2 protein protein YBL037W APL3 protein protein YOL062C APM4 protein protein YJR005W APL1 protein protein AP-3 adaptor complex Co-purification YJL024C APS3 protein protein YPL195W APL5 protein protein YGR261C APL6 protein protein YBR288C APM3 protein protein Apg12p/Apg5p/Apg16 multimeric complex Co-purification YPL149W ATG5 protein protein YBR217W ATG12 protein protein YMR159C ATG16 protein protein Arg2p/Arg5,6p complex Affinity Capture-Western YJL071W ARG2 protein protein YER069W ARG5,6 protein protein ARGR complex Two-hybrid YDR173C ARG82 protein protein YMR043W MCM1 protein protein YMR042W ARG80 protein protein YML099C ARG81 protein protein Arp2/3 protein complex Affinity Capture-Western Co-purification YIL062C ARC15 protein protein YNR035C ARC35 protein protein YJR065C ARP3 protein protein YLR370C ARC18 protein protein YDL029W ARP2 protein protein YBR234C ARC40 protein protein YKL013C ARC19 protein protein Atg20p/Snx4p/Snx41p complex Affinity Capture-Western YDL113C ATG20 protein protein YDR425W SNX41 protein protein YJL036W SNX4 protein protein Aurora B-INCENP protein kinase complex Affinity Capture-Western YBR156C SLI15 protein protein YPL209C IPL1 protein protein Bi3 ribonucleoprotein complex Protein-RNA Q0115 BI3 protein protein YIR021W MRS1 protein protein Bi4p/Nam2p complex Two-hybrid Q0120 BI4 protein protein YLR382C NAM2 protein protein Bni4p/Glc7p complex Affinity Capture-Western Two-hybrid YER133W GLC7 protein protein YNL233W BNI4 protein protein box C/D snoRNP complex Affinity Capture-Western YDL014W NOP1 protein protein YEL026W SNU13 protein protein YOR310C NOP58 protein protein YLR197W SIK1 protein protein Bub1p/Bub3p complex Affinity Capture-Western YGR188C BUB1 protein protein YOR026W BUB3 protein protein Bub2p/Bfa1p complex Affinity Capture-Western YJR053W BFA1 protein protein YMR055C BUB2 protein protein Bud14p/Glc7p complex Affinity Capture-Western Two-hybrid YER133W GLC7 protein protein YAR014C BUD14 protein protein CAAX-protein geranylgeranyltransferase complex Co-purification YGL155W CDC43 protein protein YKL019W RAM2 protein protein calcineurin complex Co-purification YKL190W CNB1 protein protein YLR433C CNA1 protein protein YML057W CMP2 protein protein cAMP-dependent protein kinase Biochemical Activity YJL164C TPK1 protein protein YPL203W TPK2 protein protein YKL166C TPK3 protein protein YIL033C BCY1 protein protein Car1p/Arg3p complex Co-purification YJL088W ARG3 protein protein YPL111W CAR1 protein protein carbamoyl-phosphate synthase complex Traceable author statement YJR109C CPA2 protein protein YOR303W CPA1 protein protein carboxy-terminal domain protein kinase complex Co-purification YKL139W CTK1 protein protein YML112W CTK3 protein protein YJL006C CTK2 protein protein Cbf1p/Met4p/Met28p complex Reconstituted Complex YIR017C MET28 protein protein YNL103W MET4 protein protein YJR060W CBF1 protein protein CBF3 complex Co-purification YMR094W CTF13 protein protein YDR328C SKP1 protein protein YMR168C CEP3 protein protein YGR140W CBF2 protein protein Cbp1p/Pet309p complex Affinity Capture-MS YLR067C PET309 protein protein YJL209W CBP1 protein protein CCAAT-binding factor complex Reconstituted Complex YBL021C HAP3 protein protein YKL109W HAP4 protein protein YOR358W HAP5 protein protein YGL237C HAP2 protein protein CCR4-NOT core complex Affinity Capture-MS Affinity Capture-Western YCR093W CDC39 protein protein YNL288W CAF40 protein protein YAL021C CCR4 protein protein YNR052C POP2 protein protein YIL038C NOT3 protein protein YPR072W NOT5 protein protein YGR134W CAF130 protein protein YDL165W CDC36 protein protein YER068W MOT2 protein protein Cdc24p/Far1p/Gbetagamma protein complex Affinity Capture-Western Reconstituted Complex Two-hybrid YJL157C FAR1 protein protein YOR212W STE4 protein protein YJR086W STE18 protein protein YAL041W CDC24 protein protein Cdc28p/Clb1p complex Traceable author statement YBR160W CDC28 protein protein YGR108W CLB1 protein protein Cdc28p/Clb2p complex Traceable author statement YBR160W CDC28 protein protein YPR119W CLB2 protein protein Cdc28p/Clb3p complex Traceable author statement YBR160W CDC28 protein protein YDL155W CLB3 protein protein Cdc28p/Clb4p complex Traceable author statement YBR160W CDC28 protein protein YLR210W CLB4 protein protein Cdc28p/Clb5p complex Traceable author statement YBR160W CDC28 protein protein YPR120C CLB5 protein protein Cdc28p/Clb6p complex Traceable author statement YBR160W CDC28 protein protein YGR109C CLB6 protein protein Cdc28p/Cln1p complex Traceable author statement YBR160W CDC28 protein protein YMR199W CLN1 protein protein Cdc28p/Cln2p complex Co-purification YPL256C CLN2 protein protein YBR160W CDC28 protein protein Cdc28p/Cln3p complex Affinity Capture-Western YAL040C CLN3 protein protein YBR160W CDC28 protein protein Cdc42p/Ste20p complex Affinity Capture-Western YLR229C CDC42 protein protein YHL007C STE20 protein protein Cdc48p complex Affinity Capture-Western YDL126C CDC48 protein protein YGR048W UFD1 protein protein YBR170C NPL4 protein protein Cdc73p/Paf1p complex Affinity Capture-MS Affinity Capture-Western YGL244W RTF1 protein protein YOR123C LEO1 protein protein YLR418C CDC73 protein protein YBR279W PAF1 protein protein YOL145C CTR9 protein protein YDR138W HPR1 protein protein Cdc7p/Dbf4p complex Reconstituted Complex Two-hybrid YDL017W CDC7 protein protein YDR052C DBF4 protein protein chaperonin-containing T-complex Co-purification YJL111W CCT7 protein protein YDR188W CCT6 protein protein YJR064W CCT5 protein protein YDR212W TCP1 protein protein YDL143W CCT4 protein protein YJL008C CCT8 protein protein YIL142W CCT2 protein protein YJL014W CCT3 protein protein chromatin accessibility complex Affinity Capture-Western YOR304W ISW2 protein protein YGL133W ITC1 protein protein YDR121W DPB4 protein protein YJL065C DLS1 protein protein chromatin assembly complex Co-purification YML102W CAC2 protein protein YBR195C MSI1 protein protein YPR018W RLF2 protein protein chromatin silencing complex Affinity Capture-Western YDR227W SIR4 protein protein YLR442C SIR3 protein protein YDL042C SIR2 protein protein Chs5p/Arf-1binding proteins (ChAPs) Affinity Capture-MS Affinity Capture-Western Co-purification YMR237W BCH1 protein protein YKR027W BCH2 protein protein YJL099W CHS6 protein protein YDL192W ARF1 protein protein YLR330W CHS5 protein protein YOR299W BUD7 protein protein Chz1p/Htz1p/Htb1p complex Affinity Capture-MS Affinity Capture-Western YER030W CHZ1 protein protein YOL012C HTZ1 protein protein YDR224C HTB1 protein protein Clathrin Affinity Capture-Western YGR167W CLC1 protein protein YGL206C CHC1 protein protein cohesin loading factor complex Affinity Capture-MS YDR180W SCC2 protein protein YER147C SCC4 protein protein COMA complex Affinity Capture-Western Co-purification YPL018W CTF19 protein protein YGR179C OKP1 protein protein YDR318W MCM21 protein protein YBR211C AME1 protein protein commitment complex Co-purification YKL074C MUD2 protein protein YBR119W MUD1 protein protein YPL178W CBC2 protein protein YLR298C YHC1 protein protein YGR074W SMD1 protein protein YOR159C SME1 protein protein YLR275W SMD2 protein protein YLR147C SMD3 protein protein YML046W PRP39 protein protein YMR125W STO1 protein protein YER029C SMB1 protein protein YLR116W MSL5 protein protein YDR240C SNU56 protein protein YGR013W SNU71 protein protein YIL061C SNP1 protein protein YHR086W NAM8 protein protein YDR235W PRP42 protein protein YDL087C LUC7 protein protein YFL017W-A SMX2 protein protein YKL012W PRP40 protein protein YPR182W SMX3 protein protein COMPASS complex Affinity Capture-MS YHR119W SET1 protein protein YDR469W SDC1 protein protein YLR015W BRE2 protein protein YBR258C SHG1 protein protein YBR175W SWD3 protein protein YKL018W SWD2 protein protein YAR003W SWD1 protein protein YPL138C SPP1 protein protein COPI Co-purification YDL145C COP1 protein protein YER122C GLO3 protein protein YNL287W SEC21 protein protein YPL010W RET3 protein protein YDR238C SEC26 protein protein YGL137W SEC27 protein protein YFR051C RET2 protein protein YIL076W SEC28 protein protein COPII Affinity Capture-Western Co-purification YDL195W SEC31 protein protein YAL007C ERP2 protein protein YAR002C-A ERP1 protein protein YAL042W ERV46 protein protein YPL218W SAR1 protein protein YLR208W SEC13 protein protein YPR181C SEC23 protein protein YIL109C SEC24 protein protein YPL085W SEC16 protein protein YML012W ERV25 protein protein YGL200C EMP24 protein protein CORVET complex Affinity Capture-MS Affinity Capture-Western YLR148W PEP3 protein protein YMR231W PEP5 protein protein YLR396C VPS33 protein protein YDR495C VPS3 protein protein YPL045W VPS16 protein protein YAL002W VPS8 protein protein Cox14p/Cox1p/Mss51p complex Affinity Capture-Western YML129C COX14 protein protein Q0045 COX1 protein protein YLR203C MSS51 protein protein Csh1p/Csg2p complex Affinity Capture-Western YBR161W CSH1 protein protein YBR036C CSG2 protein protein Csm1p/Lrs4p complex Affinity Capture-Western YCR086W CSM1 protein protein YDR439W LRS4 protein protein Ctf3p protein complex Affinity Capture-Western YLR381W CTF3 protein protein YPR046W MCM16 protein protein YJR135C MCM22 protein protein Cul3p-RING ubiquitin ligase complex Affinity Capture-Western Co-purification YGR003W CUL3 protein protein YNL230C ELA1 protein protein YJR052W RAD7 protein protein YPL046C ELC1 protein protein YBR114W RAD16 protein protein CURI complex Affinity Capture-MS YLR223C IFH1 protein protein YGR090W UTP22 protein protein YCL031C RRP7 protein protein YOR039W CKB2 protein protein Cytochrome bc1 complex (Ubiquinol-cytochrome c reductase complex, complex III) Co-crystal Structure YHR001W-A QCR10 protein protein YJL166W QCR8 protein protein YGR183C QCR9 protein protein YPR191W QCR2 protein protein Q0105 COB protein protein YBL045C COR1 protein protein YFR033C QCR6 protein protein YOR065W CYT1 protein protein YDR529C QCR7 protein protein YEL024W RIP1 protein protein Cytochrome c oxidase (complex IV) Co-purification YGL191W COX13 protein protein YLR038C COX12 protein protein Q0275 COX3 protein protein Q0250 COX2 protein protein Q0045 COX1 protein protein YMR256C COX7 protein protein YHR051W COX6 protein protein YGL187C COX4 protein protein YNL052W COX5A protein protein YDL067C COX9 protein protein YLR395C COX8 protein protein cytoplasmic dynein complex Affinity Capture-Western YKR054C DYN1 protein protein YDR424C DYN2 protein protein YMR299C DYN3 protein protein YDR488C PAC11 protein protein Cytoplasmic exosome complex Affinity Capture-MS YOL021C DIS3 protein protein YGR158C MTR3 protein protein YOL142W RRP40 protein protein YGR195W SKI6 protein protein YHR069C RRP4 protein protein YDL111C RRP42 protein protein YCR035C RRP43 protein protein YNL232W CSL4 protein protein YDR280W RRP45 protein protein YGR095C RRP46 protein protein cytoplasmic ribosomal large subunit Affinity Capture-MS YMR194W RPL36A protein protein YPL249C-A RPL36B protein protein YFL034C-A RPL22B protein protein YLR061W RPL22A protein protein YGR034W RPL26B protein protein YMR121C RPL15B protein protein YLR344W RPL26A protein protein YNL067W RPL9B protein protein YGL147C RPL9A protein protein YLR029C RPL15A protein protein YDR382W RPP2B protein protein YOL039W RPP2A protein protein YLR075W RPL10 protein protein YPL079W RPL21B protein protein YBR191W RPL21A protein protein YDR012W RPL4B protein protein YBR031W RPL4A protein protein YDL075W RPL31A protein protein YLR406C RPL31B protein protein YHL033C RPL8A protein protein YIL133C RPL16A protein protein YPR102C RPL11A protein protein YNL069C RPL16B protein protein YGR085C RPL11B protein protein YDL081C RPP1A protein protein YDL130W RPP1B protein protein YLL045C RPL8B protein protein YMR242C RPL20A protein protein YHR010W RPL27A protein protein YGR148C RPL24B protein protein YDR471W RPL27B protein protein YGL031C RPL24A protein protein YLR325C RPL38 protein protein YIL052C RPL34B protein protein YJL189W RPL39 protein protein YER056C-A RPL34A protein protein YGL030W RPL30 protein protein YBL092W RPL32 protein protein YJL177W RPL17B protein protein YKL006W RPL14A protein protein YHL001W RPL14B protein protein YKL180W RPL17A protein protein YOR063W RPL3 protein protein YPL198W RPL7B protein protein YPL131W RPL5 protein protein YGL076C RPL7A protein protein YDR500C RPL37B protein protein YOR234C RPL33B protein protein YLR340W RPP0 protein protein YOL127W RPL25 protein protein YPL143W RPL33A protein protein YGL103W RPL28 protein protein YFR032C-A RPL29 protein protein YDL082W RPL13A protein protein YMR142C RPL13B protein protein YML073C RPL6A protein protein YLR185W RPL37A protein protein YLR448W RPL6B protein protein cytoplasmic ribosomal small subunit Affinity Capture-MS YDR447C RPS17B protein protein YML024W RPS17A protein protein YGL123W RPS2 protein protein YLR441C RPS1A protein protein YNL178W RPS3 protein protein YML063W RPS1B protein protein YHR021C RPS27B protein protein YLR388W RPS29A protein protein YHL015W RPS20 protein protein YDL061C RPS29B protein protein YGR027C RPS25A protein protein YOL121C RPS19A protein protein YKL156W RPS27A protein protein YLR333C RPS25B protein protein YNL302C RPS19B protein protein YNL096C RPS7B protein protein YPL081W RPS9A protein protein YBR189W RPS9B protein protein YMR230W RPS10B protein protein YOR293W RPS10A protein protein YMR116C ASC1 protein protein YLR048W RPS0B protein protein YGR214W RPS0A protein protein YJL191W RPS14B protein protein YCR031C RPS14A protein protein YJR123W RPS5 protein protein YOR096W RPS7A protein protein YER131W RPS26B protein protein YGL189C RPS26A protein protein YOL040C RPS15 protein protein YOR369C RPS12 protein protein YLR264W RPS28B protein protein YOR167C RPS28A protein protein YDR064W RPS13 protein protein YLR167W RPS31 protein protein YJL136C RPS21B protein protein YJL190C RPS22A protein protein YKR057W RPS21A protein protein YLR367W RPS22B protein protein DASH complex Co-purification YDR201W SPC19 protein protein YGR113W DAM1 protein protein YGL061C DUO1 protein protein YKL138C-A HSK3 protein protein YDR016C DAD1 protein protein YKR083C DAD2 protein protein YKR037C SPC34 protein protein YKL052C ASK1 protein protein YBR233W-A DAD3 protein protein YDR320C-A DAD4 protein protein Dcs1p/Dcs2 heterodimer Affinity Capture-Western YLR270W DCS1 protein protein YOR173W DCS2 protein protein Decapping Enzyme Complex Affinity Capture-Western YOL149W DCP1 protein protein YNL118C DCP2 protein protein Def1p/Rad26p complex Co-purification YKL054C DEF1 protein protein YJR035W RAD26 protein protein degradosome Affinity Capture-MS YPL029W SUV3 protein protein YMR287C DSS1 protein protein Dig1p/Ste12p/Dig2p complex Reconstituted Complex YPL049C DIG1 protein protein YHR084W STE12 protein protein YDR480W DIG2 protein protein DNA ligase IV Two-hybrid YGL090W LIF1 protein protein YOR005C DNL4 protein protein DNA polymerase delta complex Co-purification Reconstituted Complex YJR006W POL31 protein protein YJR043C POL32 protein protein YDL102W POL3 protein protein DNA polymerase epsilon complex Co-purification YDR121W DPB4 protein protein YBR278W DPB3 protein protein YPR175W DPB2 protein protein YNL262W POL2 protein protein DNA replication factor A complex Co-purification YJL173C RFA3 protein protein YNL312W RFA2 protein protein YAR007C RFA1 protein protein DNA replication factor C complex (Ctf18p/Ctf8p/dcc1p) Affinity Capture-Western YBR087W RFC5 protein protein YMR078C CTF18 protein protein YNL290W RFC3 protein protein YOL094C RFC4 protein protein YCL016C DCC1 protein protein YJR068W RFC2 protein protein YHR191C CTF8 protein protein DNA replication factor C complex (Elg1p) Affinity Capture-Western YBR087W RFC5 protein protein YNL290W RFC3 protein protein YOR144C ELG1 protein protein YOL094C RFC4 protein protein YJR068W RFC2 protein protein DNA replication factor C complex (Rad24p) Reconstituted Complex YER173W RAD24 protein protein YBR087W RFC5 protein protein YNL290W RFC3 protein protein YOL094C RFC4 protein protein YJR068W RFC2 protein protein DNA replication factor C complex (Rcf1p) Co-purification YBR087W RFC5 protein protein YNL290W RFC3 protein protein YOL094C RFC4 protein protein YOR217W RFC1 protein protein YJR068W RFC2 protein protein DNA-directed RNA polymerase I complex Co-crystal Structure YPR110C RPC40 protein protein YOR341W RPA190 protein protein YPR010C RPA135 protein protein YOR224C RPB8 protein protein YPR187W RPO26 protein protein YBR154C RPB5 protein protein YNL248C RPA49 protein protein YJL148W RPA34 protein protein YDR156W RPA14 protein protein YOR210W RPB10 protein protein YJR063W RPA12 protein protein YNL113W RPC19 protein protein YOR340C RPA43 protein protein YHR143W-A RPC10 protein protein DNA-directed RNA polymerase II complex Co-crystal Structure YOR151C RPB2 protein protein YOL005C RPB11 protein protein YIL021W RPB3 protein protein YOR210W RPB10 protein protein YGL070C RPB9 protein protein YOR224C RPB8 protein protein YDL140C RPO21 protein protein YPR187W RPO26 protein protein YBR154C RPB5 protein protein YJL140W RPB4 protein protein YHR143W-A RPC10 protein protein YDR404C RPB7 protein protein DNA-directed RNA polymerase III complex Affinity Capture-Western YPR110C RPC40 protein protein YDL150W RPC53 protein protein YOR224C RPB8 protein protein YPR187W RPO26 protein protein YBR154C RPB5 protein protein YOR207C RET1 protein protein YJL011C RPC17 protein protein YKL144C RPC25 protein protein YOR116C RPO31 protein protein YOR210W RPB10 protein protein YKR025W RPC37 protein protein YNL113W RPC19 protein protein YNR003C RPC34 protein protein YPR190C RPC82 protein protein YNL151C RPC31 protein protein YHR143W-A RPC10 protein protein YDR045C RPC11 protein protein Dop1p/Mon2p complex Affinity Capture-MS YDR141C DOP1 protein protein YNL297C MON2 protein protein Dpb11p/Sld2p complex Affinity Capture-Western Two-hybrid YKL108W SLD2 protein protein YJL090C DPB11 protein protein DSIF complex Affinity Capture-Western YML010W SPT5 protein protein YGR063C SPT4 protein protein Dsl1p complex Affinity Capture-Western YDR498C SEC20 protein protein YNL258C DSL1 protein protein YGL098W USE1 protein protein YLR440C SEC39 protein protein YGL145W TIP20 protein protein YOR075W UFE1 protein protein dynactin complex Affinity Capture-Western Two-hybrid YDR106W ARP10 protein protein YPL174C NIP100 protein protein YHR129C ARP1 protein protein YMR294W JNM1 protein protein eEF1 Co-purification YAL003W EFB1 protein protein YKL081W TEF4 protein protein YPL048W CAM1 protein protein EGO complex Affinity Capture-Western Two-hybrid YKR007W MEH1 protein protein YBR077C SLM4 protein protein YGR163W GTR2 protein protein eIF1/eIF1A/40S complex FRET YNL244C SUI1 protein protein YMR260C TIF11 protein protein eIF2 Co-purification YJR007W SUI2 protein protein YPL237W SUI3 protein protein YER025W GCD11 protein protein eIF2B Affinity Capture-Western YGR083C GCD2 protein protein YOR260W GCD1 protein protein YLR291C GCD7 protein protein YKR026C GCN3 protein protein YDR211W GCD6 protein protein eIF3 Affinity Capture-Western Reconstituted Complex Two-hybrid YMR146C TIF34 protein protein YBR079C RPG1 protein protein YDR429C TIF35 protein protein YMR012W CLU1 protein protein YLR192C HCR1 protein protein YMR309C NIP1 protein protein YOR361C PRT1 protein protein eIF4F Affinity Capture-Western YGR162W TIF4631 protein protein YOL139C CDC33 protein protein Eisosome Affinity Capture-MS YPL004C LSP1 protein protein YGR086C PIL1 protein protein EKC/KEOPS protein complex Affinity Capture-MS Affinity Capture-Western YGR262C BUD32 protein protein YKR038C KAE1 protein protein YJL184W GON7 protein protein YKR095W-A PCC1 protein protein Ela1p/Elc1p complex Reconstituted Complex YNL230C ELA1 protein protein YPL046C ELC1 protein protein Elongator complex Affinity Capture-MS YPL101W ELP4 protein protein YPL086C ELP3 protein protein YHR187W IKI1 protein protein YGR200C ELP2 protein protein YLR384C IKI3 protein protein YMR312W ELP6 protein protein ER V-ATPase assembly complex Co-purification YKL119C VPH2 protein protein YHR060W VMA22 protein protein Erv41p/Erv46p complex Affinity Capture-Western YAL042W ERV46 protein protein YML067C ERV41 protein protein ESCRT I complex Affinity Capture-Western YGR206W MVB12 protein protein YCL008C STP22 protein protein YLR119W SRN2 protein protein YPL065W VPS28 protein protein ESCRT II complex Co-purification YPL002C SNF8 protein protein YLR417W VPS36 protein protein YJR102C VPS25 protein protein ESCRT III complex Affinity Capture-Western YMR077C VPS20 protein protein YLR025W SNF7 protein protein YKL041W VPS24 protein protein YKL002W DID4 protein protein Esp1p/Pds1p complex Affinity Capture-Western YDR113C PDS1 protein protein YGR098C ESP1 protein protein Exocyst complex Affinity Capture-MS YER008C SEC3 protein protein YBR102C EXO84 protein protein YPR055W SEC8 protein protein YDR166C SEC5 protein protein YIL068C SEC6 protein protein YLR166C SEC10 protein protein YJL085W EXO70 protein protein YGL233W SEC15 protein protein F0/F1 ATP synthase (complex V) Co-purification YOL077W-A ATP19 protein protein YML081C-A ATP18 protein protein YPL271W ATP15 protein protein YLR295C ATP14 protein protein YDR377W ATP17 protein protein YDL004W ATP16 protein protein YBR039W ATP3 protein protein YPL078C ATP4 protein protein YBL099W ATP1 protein protein Q0130 OLI1 protein protein YJR121W ATP2 protein protein YDL181W INH1 protein protein YDR322C-A TIM11 protein protein YKL016C ATP7 protein protein Q0080 ATP8 protein protein YDR298C ATP5 protein protein YPR020W ATP20 protein protein Q0085 ATP6 protein protein FACT complex Co-purification YML069W POB3 protein protein YGL207W SPT16 protein protein Far3p/Far7p/Far8p/Far9p/Far10p/Far11p complex Two-hybrid YMR052W FAR3 protein protein YMR029C FAR8 protein protein YFR008W FAR7 protein protein YLR238W FAR10 protein protein YNL127W FAR11 protein protein YDR200C VPS64 protein protein Fatty Acid Import Complex Affinity Capture-Western Two-hybrid YBR041W FAT1 protein protein YMR246W FAA4 protein protein YOR317W FAA1 protein protein fatty acid synthase complex Co-purification YKL182W FAS1 protein protein YPL231W FAS2 protein protein FBP degradation complex Affinity Capture-MS YDL176W YDL176W protein protein YIL097W FYV10 protein protein YBR105C VID24 protein protein YIL017C VID28 protein protein YGL227W VID30 protein protein YCL039W GID7 protein protein YMR135C GID8 protein protein YDR255C RMD5 protein protein Fig4p/Vac14p complex Affinity Capture-Western YLR386W VAC14 protein protein YNL325C FIG4 protein protein Fth1p/Fet5p complex Affinity Capture-Western YFL041W FET5 protein protein YBR207W FTH1 protein protein Gac1p/Glc7p complex Affinity Capture-Western Two-hybrid YER133W GLC7 protein protein YOR178C GAC1 protein protein GAL3p/GAL80p complex Co-purification YML051W GAL80 protein protein YDR009W GAL3 protein protein GAL4p/GAL80p complex Reconstituted Complex YML051W GAL80 protein protein YPL248C GAL4 protein protein gamma-tubulin complex Affinity Capture-Western YHR172W SPC97 protein protein YNL126W SPC98 protein protein YLR212C TUB4 protein protein GARP complex Affinity Capture-MS YDR027C VPS54 protein protein YDR484W VPS52 protein protein YJL029C VPS53 protein protein YKR020W VPS51 protein protein Gcd10p/Gcd14p complex Co-purification YNL062C GCD10 protein protein YJL125C GCD14 protein protein Gcn1p/Gcn20p complex Affinity Capture-Western Two-hybrid YGL195W GCN1 protein protein YFR009W GCN20 protein protein GCR complex Two-hybrid YPL075W GCR1 protein protein YNL199C GCR2 protein protein Geranylgeranyltransferase II (GGTase II) Co-purification YPR176C BET2 protein protein YJL031C BET4 protein protein GET complex Affinity Capture-MS YER083C GET2 protein protein YDL100C GET3 protein protein YGL020C GET1 protein protein GINS complex Affinity Capture-Western Two-hybrid YJL072C PSF2 protein protein YDR013W PSF1 protein protein YDR489W SLD5 protein protein YOL146W PSF3 protein protein Gip1p/Glc7p complex Affinity Capture-Western Two-hybrid YER133W GLC7 protein protein YBR045C GIP1 protein protein glycine cleavage complex Traceable author statement YMR189W GCV2 protein protein YAL044C GCV3 protein protein YFL018C LPD1 protein protein YDR019C GCV1 protein protein glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex Affinity Capture-Western YDR437W GPI19 protein protein YPL175W SPT14 protein protein YPL096C-A ERI1 protein protein YNL038W GPI15 protein protein YGR216C GPI1 protein protein YPL076W GPI2 protein protein Golgi transport complex Affinity Capture-MS YER157W COG3 protein protein YPR105C COG4 protein protein YNL051W COG5 protein protein YNL041C COG6 protein protein YGL005C COG7 protein protein YML071C COG8 protein protein YGL223C COG1 protein protein YGR120C COG2 protein protein GPI-anchor transamidase complex Affinity Capture-Western YDR331W GPI8 protein protein YLR459W GAB1 protein protein YLR088W GAA1 protein protein YHR188C GPI16 protein protein YDR434W GPI17 protein protein Grh1p/Bug1p complex Affinity Capture-Western YDL099W BUG1 protein protein YDR517W GRH1 protein protein GSE Complex Affinity Capture-MS Co-purification Reconstituted Complex YKR007W MEH1 protein protein YML121W GTR1 protein protein YGR163W GTR2 protein protein YKL143W LTV1 protein protein GSH degradosomal complex Affinity Capture-Western Two-hybrid YBR281C DUG2 protein protein YNL191W DUG3 protein protein YFR044C DUG1 protein protein guanyl-nucleotide exchange factor complex Affinity Capture-Western YDR137W RGP1 protein protein YLR039C RIC1 protein protein Gyl1p/Gyp5p complex Affinity Capture-Western Co-localization YPL249C GYP5 protein protein YMR192W GYL1 protein protein H+-transporting ATPase, Golgi Biochemical Activity Co-localization YDL185W TFP1 protein protein YPL234C TFP3 protein protein YMR054W STV1 protein protein YHR026W PPA1 protein protein YBR127C VMA2 protein protein YKL080W VMA5 protein protein YOR332W VMA4 protein protein YGR020C VMA7 protein protein YLR447C VMA6 protein protein YEL027W CUP5 protein protein YEL051W VMA8 protein protein YHR039C-A VMA10 protein protein YPR036W VMA13 protein protein H+-transporting ATPase, vacuolar Biochemical Activity Co-localization YOR270C VPH1 protein protein YDL185W TFP1 protein protein YPL234C TFP3 protein protein YHR026W PPA1 protein protein YBR127C VMA2 protein protein YKL080W VMA5 protein protein YOR332W VMA4 protein protein YGR020C VMA7 protein protein YLR447C VMA6 protein protein YEL027W CUP5 protein protein YEL051W VMA8 protein protein YHR039C-A VMA10 protein protein YPR036W VMA13 protein protein HAT-B complex Two-hybrid YEL056W HAT2 protein protein YPL001W HAT1 protein protein YLL022C HIF1 protein protein heterodimeric G-protein complex Affinity Capture-Western YOR212W STE4 protein protein YJR086W STE18 protein protein heterotrimeric G-protein complex Biochemical Activity YHR005C GPA1 protein protein YOR212W STE4 protein protein YJR086W STE18 protein protein HIR complex Affinity Capture-MS YBR215W HPC2 protein protein YOR038C HIR2 protein protein YBL008W HIR1 protein protein YJR140C HIR3 protein protein histone deacetylase complex Affinity Capture-Western Reconstituted Complex YPR179C HDA3 protein protein YDR295C HDA2 protein protein YNL021W HDA1 protein protein histone H2A phosphatase complex Affinity Capture-MS YBL046W PSY4 protein protein YNL201C PSY2 protein protein YDR075W PPH3 protein protein HMC Complex Affinity Capture-MS YCL037C SRO9 protein protein YNL064C YDJ1 protein protein YMR186W HSC82 protein protein YBL075C SSA3 protein protein Holliday junction resolvase complex Reconstituted Complex YDR386W MUS81 protein protein YBR098W MMS4 protein protein Hop2p/Mnd1p complex Affinity Capture-Western YGL033W HOP2 protein protein YGL183C MND1 protein protein HOPS complex Affinity Capture-Western YLR148W PEP3 protein protein YMR231W PEP5 protein protein YDL077C VAM6 protein protein YLR396C VPS33 protein protein YDR080W VPS41 protein protein YPL045W VPS16 protein protein Hse1p/Vps27p complex Affinity Capture-Western YHL002W HSE1 protein protein YNR006W VPS27 protein protein Hym1p/Kic1p/Sog2p complex Affinity Capture-Western Two-hybrid YKL189W HYM1 protein protein YOR353C SOG2 protein protein YHR102W KIC1 protein protein i-AAA complex Affinity Capture-Western Co-purification YPR024W YME1 protein protein YCL044C MGR1 protein protein Ino2p/Ino4p basic helix-loop-helix heteromeric complex Far Western Two-hybrid YDR123C INO2 protein protein YOL108C INO4 protein protein Ino80p complex Affinity Capture-MS Affinity Capture-Western YFL013C IES1 protein protein YPL129W TAF14 protein protein YLR052W IES3 protein protein YFL039C ACT1 protein protein YOR189W IES4 protein protein YOR141C ARP8 protein protein YPL235W RVB2 protein protein YNL059C ARP5 protein protein YGL150C INO80 protein protein YJL081C ARP4 protein protein YDL002C NHP10 protein protein YDR190C RVB1 protein protein Isocitrate dehydrogenase Two-hybrid YOR136W IDH2 protein protein YNL037C IDH1 protein protein ISW1a complex Affinity Capture-Western YBR245C ISW1 protein protein YFR013W IOC3 protein protein ISW1b complex Affinity Capture-Western YBR245C ISW1 protein protein YLR095C IOC2 protein protein YMR044W IOC4 protein protein karyopherin docking subcomplex of the Nuclear Pore Complex (NPC) Affinity Capture-Western YDL088C ASM4 protein protein YBL079W NUP170 protein protein YMR153W NUP53 protein protein Kel1p/Kel2p complex Affinity Capture-Western Two-hybrid YHR158C KEL1 protein protein YGR238C KEL2 protein protein Kel1p/Kel2p/Lte1p complex Affinity Capture-Western YHR158C KEL1 protein protein YGR238C KEL2 protein protein YAL024C LTE1 protein protein Kornberg's mediator (SRB) complex Affinity Capture-Western Two-hybrid YHR041C SRB2 protein protein YOL051W GAL11 protein protein YLR071C RGR1 protein protein YPR168W NUT2 protein protein YGL151W NUT1 protein protein YGL127C SOH1 protein protein YCR081W SRB8 protein protein YDR308C SRB7 protein protein YBR253W SRB6 protein protein YGR104C SRB5 protein protein YER022W SRB4 protein protein YMR112C MED11 protein protein YHR058C MED6 protein protein YBL093C ROX3 protein protein YOL135C MED7 protein protein YOR174W MED4 protein protein YPL042C SSN3 protein protein YDR443C SSN2 protein protein YBR193C MED8 protein protein YNL236W SIN4 protein protein YGL025C PGD1 protein protein YDL005C MED2 protein protein YNL025C SSN8 protein protein YNR010W CSE2 protein protein YPR070W MED1 protein protein Ku complex Co-purification YMR284W YKU70 protein protein YMR106C YKU80 protein protein Lge1p/Bre1p complex Affinity Capture-MS YPL055C LGE1 protein protein YDL074C BRE1 protein protein LMA1 complex Co-purification YNL015W PBI2 protein protein YLR043C TRX1 protein protein luminal surveillance complex Affinity Capture-MS YLR207W HRD3 protein protein YJL034W KAR2 protein protein YDR057W YOS9 protein protein m-AAA complex Affinity Capture-Western YMR089C YTA12 protein protein YER017C AFG3 protein protein Mad1p/Mad2p complex Affinity Capture-Western Co-purification Two-hybrid YGL086W MAD1 protein protein YJL030W MAD2 protein protein MBF complex Co-purification YLR182W SWI6 protein protein YDL056W MBP1 protein protein Mcm2-7 complex Co-purification YBR202W MCM7 protein protein YBL023C MCM2 protein protein YEL032W MCM3 protein protein YPR019W MCM4 protein protein YLR274W MCM5 protein protein YGL201C MCM6 protein protein Mdm12p/Mmm1p/Mdm10p complex Affinity Capture-Western YLL006W MMM1 protein protein YOL009C MDM12 protein protein YAL010C MDM10 protein protein Mei5p/Sae3p complex Affinity Capture-Western YPL121C MEI5 protein protein YHR079C-A SAE3 protein protein meiotic recombination initiation complex Affinity Capture-Western YLR329W REC102 protein protein YHR157W REC104 protein protein YHL022C SPO11 protein protein Met4p/Met28p/Met31p complex Reconstituted Complex Two-hybrid YPL038W MET31 protein protein YIR017C MET28 protein protein YNL103W MET4 protein protein Met4p/Met28p/Met32p complex Reconstituted Complex Two-hybrid YDR253C MET32 protein protein YIR017C MET28 protein protein YNL103W MET4 protein protein methionyl glutamyl tRNA synthetase complex Affinity Capture-Western YGR264C MES1 protein protein YGL245W GUS1 protein protein YGL105W ARC1 protein protein Mgm1p/Ugo1p/Fzo1p complex Affinity Capture-Western YBR179C FZO1 protein protein YDR470C UGO1 protein protein YOR211C MGM1 protein protein MIND complex Affinity Capture-Western Co-purification YAL034W-A MTW1 protein protein YJR112W NNF1 protein protein YIR010W DSN1 protein protein YPL233W NSL1 protein protein mitochondrial ATPase inhibitor complex Co-purification YDL130W-A STF1 protein protein YGR008C STF2 protein protein YDL181W INH1 protein protein mitochondrial inner membrane peptidase complex Affinity Capture-Western YMR150C IMP1 protein protein YMR035W IMP2 protein protein YEL059C-A SOM1 protein protein mitochondrial inner membrane presequence translocase complex Affinity Capture - Western Two-hybrid YLR008C PAM18 protein protein YJL104W PAM16 protein protein YGR033C TIM21 protein protein YNR017W TIM23 protein protein YPL063W TIM50 protein protein YJL143W TIM17 protein protein mitochondrial inner membrane protein insertion complex Affinity Capture-Western YBR091C MRS5 protein protein YDL217C TIM22 protein protein YOR297C TIM18 protein protein YJL054W TIM54 protein protein mitochondrial intermembrane space protein transporter complex Affinity Capture-Western Co-purification YEL020W-A TIM9 protein protein YHR005C-A MRS11 protein protein mitochondrial outer membrane translocase complex Affinity Capture-Western Co-purification YPR133W-A TOM5 protein protein YNL121C TOM70 protein protein YNL070W TOM7 protein protein YOR045W TOM6 protein protein YNL131W TOM22 protein protein YMR203W TOM40 protein protein YGR082W TOM20 protein protein mitochondrial oxoglutarate dehydrogenase complex Co-purification YDR148C KGD2 protein protein YFL018C LPD1 protein protein YIL125W KGD1 protein protein mitochondrial processing peptidase complex Co-purification YLR163C MAS1 protein protein YHR024C MAS2 protein protein mitochondrial pyruvate dehydrogenase complex Affinity Capture-MS YNL071W LAT1 protein protein YIL042C PKP1 protein protein YFL018C LPD1 protein protein YOR090C PTC5 protein protein YGR193C PDX1 protein protein YER178W PDA1 protein protein YBR221C PDB1 protein protein mitochondrial ribosomal large subunit Affinity Capture-MS YPL173W MRPL40 protein protein YML025C YML6 protein protein YGL068W MNP1 protein protein YEL050C RML2 protein protein YKR085C MRPL20 protein protein YDL202W MRPL11 protein protein YCR046C IMG1 protein protein YNL284C MRPL10 protein protein YCR071C IMG2 protein protein YKR006C MRPL13 protein protein YLR312W-A MRPL15 protein protein YNL252C MRPL17 protein protein YBL038W MRPL16 protein protein YNL185C MRPL19 protein protein YBR122C MRPL36 protein protein YBR268W MRPL37 protein protein YKL170W MRPL38 protein protein YML009C MRPL39 protein protein YCR003W MRPL32 protein protein YMR286W MRPL33 protein protein YDR322W MRPL35 protein protein YDR116C MRPL1 protein protein YPR100W MRPL51 protein protein YLR439W MRPL4 protein protein YKL167C MRP49 protein protein YNR022C MRPL50 protein protein YMR024W MRPL3 protein protein YHR147C MRPL6 protein protein YDR405W MRP20 protein protein YJL063C MRPL8 protein protein YDR237W MRPL7 protein protein YGR220C MRPL9 protein protein YPL183W-A YPL183W-A protein protein YKL138C MRPL31 protein protein YMR193W MRPL24 protein protein YOR150W MRPL23 protein protein YNL177C MRPL22 protein protein YDR115W YDR115W protein protein YDR462W MRPL28 protein protein YNL005C MRP7 protein protein YBR282W MRPL27 protein protein YGR076C MRPL25 protein protein YJL096W MRPL49 protein protein YMR225C MRPL44 protein protein mitochondrial ribosomal small subunit Affinity Capture-MS YNL306W MRPS18 protein protein YDL045W-A MRP10 protein protein YGR165W MRPS35 protein protein YMR188C MRPS17 protein protein YPL013C MRPS16 protein protein YER050C RSM18 protein protein YNR037C RSM19 protein protein YGR084C MRP13 protein protein YPL118W MRP51 protein protein YNL137C NAM9 protein protein YDR041W RSM10 protein protein YKL003C MRP17 protein protein YNL081C SWS2 protein protein YFR049W YMR31 protein protein YJR101W RSM26 protein protein YDR337W MRPS28 protein protein YGR215W RSM27 protein protein YBL090W MRP21 protein protein Q0140 VAR1 protein protein YBR251W MRPS5 protein protein YHL004W MRP4 protein protein YBR146W MRPS9 protein protein YJR113C RSM7 protein protein YMR158W MRPS8 protein protein YOR158W PET123 protein protein YHR075C PPE1 protein protein YIL093C RSM25 protein protein YDR175C RSM24 protein protein YPR166C MRP2 protein protein YGL129C RSM23 protein protein YDR347W MRP1 protein protein YKL155C RSM22 protein protein mitochondrial sorting and assembly machinery complex Affinity Capture-Western YAL010C MDM10 protein protein YNL026W SAM50 protein protein YMR060C SAM37 protein protein YHR083W SAM35 protein protein mitotic checkpoint complex Affinity Capture-Western YJL030W MAD2 protein protein YJL013C MAD3 protein protein YGL116W CDC20 protein protein YOR026W BUB3 protein protein Mks1p/Rtg2p complex Affinity Capture-Western YNL076W MKS1 protein protein YGL252C RTG2 protein protein Mlh1p/Mlh2p complex Affinity Capture-Western Two-hybrid YLR035C MLH2 protein protein YMR167W MLH1 protein protein Mlh1p/Mlh3p complex Affinity Capture-Western Two-hybrid YMR167W MLH1 protein protein YPL164C MLH3 protein protein Mlh1p/Pms1p complex Affinity Capture-Western Two-hybrid YMR167W MLH1 protein protein YNL082W PMS1 protein protein Mob1p/Dbf2p complex Affinity Capture-Western Reconstituted Complex Two-hybrid YGR092W DBF2 protein protein YIL106W MOB1 protein protein Mob2p/Cbk1p complex Affinity Capture-Western YFL034C-B MOB2 protein protein YNL161W CBK1 protein protein Mon1p/Ccz1p complex Affinity Capture-Western YBR131W CCZ1 protein protein YGL124C MON1 protein protein monopolin complex Affinity Capture-MS YPL204W HRR25 protein protein YCR086W CSM1 protein protein YDR439W LRS4 protein protein YER106W MAM1 protein protein Mot1p complex Reconstituted Complex YER148W SPT15 protein protein YPL082C MOT1 protein protein Mps2p/Bbp1p complex Affinity Capture-Western Co-localization Two-hybrid YLR457C NBP1 protein protein YPL255W BBP1 protein protein YGL075C MPS2 protein protein mRNA cleavage and polyadenylation specificity factor complex Affinity Capture-MS YER133W GLC7 protein protein YLR277C YSH1 protein protein YLR115W CFT2 protein protein YDR301W CFT1 protein protein YJR093C FIP1 protein protein YKR002W PAP1 protein protein YKL018W SWD2 protein protein YGR156W PTI1 protein protein YKL059C MPE1 protein protein YOR179C SYC1 protein protein YNL317W PFS2 protein protein YPR107C YTH1 protein protein YAL043C PTA1 protein protein YDR195W REF2 protein protein YNL222W SSU72 protein protein mRNA cleavage factor complex (CFI) Affinity Capture-Western YMR061W RNA14 protein protein YGL044C RNA15 protein protein YDR228C PCF11 protein protein YOL123W HRP1 protein protein YOR250C CLP1 protein protein mRNA guanylyl transferase (capping complex) Affinity Capture-Western YGL130W CEG1 protein protein YPL228W CET1 protein protein MRX complex Affinity Capture-Western YDR369C XRS2 protein protein YNL250W RAD50 protein protein YMR224C MRE11 protein protein MSH2p/MSH3p complex Reconstituted Complex YCR092C MSH3 protein protein YOL090W MSH2 protein protein MSH2p/MSH6p complex Co-purification YDR097C MSH6 protein protein YOL090W MSH2 protein protein Mst27p/Mst28p complex Co-purification YAR033W MST28 protein protein YGL051W MST27 protein protein Mtk1p/Pbp1p complex Two-hybrid YNL085W MKT1 protein protein YGR178C PBP1 protein protein Mto1p/Mss1p complex Co-purification YMR023C MSS1 protein protein YGL236C MTO1 protein protein Mtr2p/Mex67p complex Affinity Capture-Western Reconstituted Complex YPL169C MEX67 protein protein YKL186C MTR2 protein protein multi-eIF complex Affinity Capture-Western YNL244C SUI1 protein protein YMR146C TIF34 protein protein YJR007W SUI2 protein protein YPL237W SUI3 protein protein YER025W GCD11 protein protein YMR309C NIP1 protein protein YPR041W TIF5 protein protein YOR361C PRT1 protein protein nascent polypeptide-associated complex Affinity Capture-Western Co-purification YPL037C EGD1 protein protein YDR252W BTT1 protein protein YHR193C EGD2 protein protein NatA complex Affinity Capture-Western YOR253W NAT5 protein protein YDL040C NAT1 protein protein YHR013C ARD1 protein protein NatB complex Affinity Capture-Western YOL076W MDM20 protein protein YPR131C NAT3 protein protein NatC complex Affinity Capture-MS YPR051W MAK3 protein protein YCR020C-A MAK31 protein protein YEL053C MAK10 protein protein NC2 complex Co-purification YER159C BUR6 protein protein YDR397C NCB2 protein protein Ndc80p complex Affinity Capture-Western YMR117C SPC24 protein protein YER018C SPC25 protein protein YOL069W NUF2 protein protein YIL144W TID3 protein protein Nem1p/Spo7p complex Affinity Capture-Western YHR004C NEM1 protein protein YAL009W SPO7 protein protein Nfs1p/Isd11p complex Affinity Capture-MS Affinity Capture-Western Co-purification YCL017C NFS1 protein protein YER048W-A ISD11 protein protein Noc1p/Noc2p complex Affinity Capture-Western YDR060W MAK21 protein protein YOR206W NOC2 protein protein Noc2p/Noc3p complex Affinity Capture-Western YOR206W NOC2 protein protein YLR002C NOC3 protein protein Noc4p/Nop14p complex Affinity Capture-Western YDL148C NOP14 protein protein YPR144C NOC4 protein protein Nonsense-mediated mRNA decay pathway complex Two-hybrid YMR080C NAM7 protein protein YHR077C NMD2 protein protein YGR072W UPF3 protein protein Npa2p-containing subcomplex Affinity Capture-Western YLR221C RSA3 protein protein YJR041C URB2 protein protein YKL014C URB1 protein protein YOL144W NOP8 protein protein YNR038W DBP6 protein protein Nsp1p complex Co-purification YFR002W NIC96 protein protein YJL041W NSP1 protein protein YGR119C NUP57 protein protein YGL172W NUP49 protein protein Nsp1p/Nup82p complex Affinity Capture-Western YJL041W NSP1 protein protein YJL061W NUP82 protein protein Ntr1p/Ntr2p/Prp43p complex Affinity Capture-Western Co-purification Two-hybrid YLR424W SPP382 protein protein YGL120C PRP43 protein protein YKR022C NTR2 protein protein NuA3 histone acetyltransferase complex Affinity Capture-MS YPR031W NTO1 protein protein YPL129W TAF14 protein protein YOR064C YNG1 protein protein YBL052C SAS3 protein protein YJR082C EAF6 protein protein NuA4 histone acetyltransferase complex Affinity Capture-MS YJL081C ARP4 protein protein YFL024C EPL1 protein protein YGR002C SWC4 protein protein YDR359C EAF1 protein protein YFL039C ACT1 protein protein YEL018W EAF5 protein protein YOR244W ESA1 protein protein YNL107W YAF9 protein protein YPR023C EAF3 protein protein YHR090C YNG2 protein protein YNL136W EAF7 protein protein YHR099W TRA1 protein protein YJR082C EAF6 protein protein nuclear cohesin complex Affinity Capture-Western YDL003W MCD1 protein protein YIL026C IRR1 protein protein YPR007C REC8 protein protein YFL008W SMC1 protein protein YJL074C SMC3 protein protein nuclear condensin complex Affinity Capture-Western YBL097W BRN1 protein protein YDR325W YCG1 protein protein YLR272C YCS4 protein protein YFR031C SMC2 protein protein YLR086W SMC4 protein protein Nuclear exosome complex Affinity Capture-MS YOL021C DIS3 protein protein YGR158C MTR3 protein protein YHR081W LRP1 protein protein YOR001W RRP6 protein protein YOL142W RRP40 protein protein YGR195W SKI6 protein protein YHR069C RRP4 protein protein YDL111C RRP42 protein protein YCR035C RRP43 protein protein YNL232W CSL4 protein protein YDR280W RRP45 protein protein YGR095C RRP46 protein protein nuclear ubiquitin ligase complex Reconstituted Complex YOL133W HRT1 protein protein YDL132W CDC53 protein protein YJR090C GRR1 protein protein YDR328C SKP1 protein protein nucleolar ribonuclease P complex Affinity Capture-MS YNL221C POP1 protein protein YNL282W POP3 protein protein YBR257W POP4 protein protein YAL033W POP5 protein protein YIR015W RPR2 protein protein YGR030C POP6 protein protein YBR167C POP7 protein protein YBL018C POP8 protein protein Nucleosomal protein complex Reconstituted Complex YBL003C HTA2 protein protein YDR225W HTA1 protein protein YBL002W HTB2 protein protein YDR224C HTB1 protein protein nucleotide-excision repair factor 1 complex Affinity Capture-Western Co-purification YPL022W RAD1 protein protein YML095C RAD10 protein protein YMR201C RAD14 protein protein nucleotide-excision repair factor 2 complex Co-purification YEL037C RAD23 protein protein YER162C RAD4 protein protein nucleotide-excision repair factor 3 complex Affinity Capture-Western YLR005W SSL1 protein protein YGR258C RAD2 protein protein YIL143C SSL2 protein protein YER171W RAD3 protein protein YPR056W TFB4 protein protein YDR311W TFB1 protein protein YPL122C TFB2 protein protein nucleotide-excision repair factor 4 complex Affinity Capture-Western YKL112W ABF1 protein protein YJR052W RAD7 protein protein YPL046C ELC1 protein protein YBR114W RAD16 protein protein Nup82 nuclear pore subcomplex Reconstituted Complex YIL115C NUP159 protein protein YDL207W GLE1 protein protein YJL061W NUP82 protein protein Nup84p complex Affinity Capture-Western YGL100W SEH1 protein protein YGL092W NUP145 protein protein YLR208W SEC13 protein protein YKL057C NUP120 protein protein YDL116W NUP84 protein protein YJR042W NUP85 protein protein OAF complex Co-localization YOR363C PIP2 protein protein YAL051W OAF1 protein protein OCA complex Affinity Capture-MS YCR095C YCR095C protein protein YHL029C YHL029C protein protein YNL032W SIW14 protein protein YNL056W OCA2 protein protein YNL099C OCA1 protein protein YDR067C YDR067C protein protein oligosaccharyl transferase complex Affinity Capture-MS YOR085W OST3 protein protein YOR103C OST2 protein protein YJL002C OST1 protein protein YML019W OST6 protein protein YMR149W SWP1 protein protein YGL226C-A OST5 protein protein YDL232W OST4 protein protein YGL022W STT3 protein protein YEL002C WBP1 protein protein Origin recognition complex Co-purification YPR162C ORC4 protein protein YNL261W ORC5 protein protein YHR118C ORC6 protein protein YML065W ORC1 protein protein YBR060C ORC2 protein protein YLL004W ORC3 protein protein other DNA repair complexes Reconstituted Complex YDR004W RAD57 protein protein YDR076W RAD55 protein protein palmitoyltransferase complex Affinity Capture-Western YOL110W SHR5 protein protein YLR246W ERF2 protein protein PAM complex Affinity Capture-MS YLR008C PAM18 protein protein YKR065C PAM17 protein protein YJL104W PAM16 protein protein YOR232W MGE1 protein protein YIL022W TIM44 protein protein YJR045C SSC1 protein protein PAN complex Affinity Capture-Western Co-purification Two-hybrid YGL094C PAN2 protein protein YKL025C PAN3 protein protein Permease-Oxidase Complex Biochemical Activity YER145C FTR1 protein protein YMR058W FET3 protein protein peroxin docking complex Affinity Capture-Western YNL214W PEX17 protein protein YGL153W PEX14 protein protein YLR191W PEX13 protein protein Phenylalaninine-tRNA-ligase Co-purification YLR060W FRS1 protein protein YFL022C FRS2 protein protein Pho85p/Pcl10p complex Affinity Capture-Western Reconstituted Complex YGL134W PCL10 protein protein YPL031C PHO85 protein protein Pho85p/Pcl1p complex Two-hybrid YNL289W PCL1 protein protein YPL031C PHO85 protein protein Pho85p/Pcl2p complex Affinity Capture-Western Reconstituted Complex YDL127W PCL2 protein protein YPL031C PHO85 protein protein Pho85p/Pcl8p complex Two-hybrid YPL219W PCL8 protein protein YPL031C PHO85 protein protein Pho85p/Pho80p complex Two-hybrid YOL001W PHO80 protein protein YPL031C PHO85 protein protein phosphatidylinositol (PtdIns) 3-kinase complex (functions in autophagy) Affinity Capture-MS Affinity Capture-Western YBR128C ATG14 protein protein YPL120W VPS30 protein protein YBR097W VPS15 protein protein YLR240W VPS34 protein protein phosphatidylinositol (PtdIns) 3-kinase complex (functions in CPY sorting) Affinity Capture-MS Affinity Capture-Western YPL120W VPS30 protein protein YBR097W VPS15 protein protein YLR240W VPS34 protein protein YLR360W VPS38 protein protein Png1p/Rad23p complex Reconstituted Complex YPL096W PNG1 protein protein YEL037C RAD23 protein protein polarisome complex Affinity Capture-Western Two-hybrid YLR319C BUD6 protein protein YLL021W SPA2 protein protein YER149C PEA2 protein protein Polzeta-Rev1p complex Affinity Capture-Western YOR346W REV1 protein protein YIL139C REV7 protein protein YPL167C REV3 protein protein prefoldin complex Affinity Capture-Western YJL179W PFD1 protein protein YNL153C GIM3 protein protein YEL003W GIM4 protein protein YML094W GIM5 protein protein YLR200W YKE2 protein protein YGR078C PAC10 protein protein prohibitin complex Affinity Capture-Western YGR231C PHB2 protein protein YGR132C PHB1 protein protein protein farnesyltransferase complex Affinity Capture-Western YKL019W RAM2 protein protein YDL090C RAM1 protein protein protein kinase CK2 complex Affinity Capture-Western YOR061W CKA2 protein protein YIL035C CKA1 protein protein YGL019W CKB1 protein protein YOR039W CKB2 protein protein Protein O-mannosyltransferase(Pmt1p/Pmt2p) Affinity Capture-Western YDL095W PMT1 protein protein YAL023C PMT2 protein protein Protein O-mannosyltransferase(Pmt3p/Pmt5p) Affinity Capture-Western YOR321W PMT3 protein protein YDL093W PMT5 protein protein protein phosphatase type 2A complex (Cdc55p) Affinity Capture-Western YGL190C CDC55 protein protein YAL016W TPD3 protein protein YDL134C PPH21 protein protein protein phosphatase type 2A complex (Rts1p) Affinity Capture-Western YOR014W RTS1 protein protein YAL016W TPD3 protein protein YDL134C PPH21 protein protein Prp19-associated complex Affinity Capture-Western Two-hybrid YMR213W CEF1 protein protein YBR188C NTC20 protein protein YLR117C CLF1 protein protein YJR050W ISY1 protein protein YGR129W SYF2 protein protein YPR101W SNT309 protein protein YLL036C PRP19 protein protein YDR416W SYF1 protein protein Prp9p/Prp11p/Prp21p complex(SF3a complex) Affinity Capture-MS YDL030W PRP9 protein protein YDL043C PRP11 protein protein YJL203W PRP21 protein protein Psr1p/Whi2p complex Affinity Capture-Western Two-hybrid YLL010C PSR1 protein protein YOR043W WHI2 protein protein Pxa1p/Pxa2p complex Affinity Capture-Western YKL188C PXA2 protein protein YPL147W PXA1 protein protein Q-biosynthetic Coq polypeptide complex Affinity Capture-Western Co-purification YDR204W COQ4 protein protein YOL096C COQ3 protein protein Rad17p/Ddc1p/Mec3p complex Affinity Capture-Western YPL194W DDC1 protein protein YLR288C MEC3 protein protein YOR368W RAD17 protein protein Rad53p/Asf1p complex Affinity Capture-Western YJL115W ASF1 protein protein YPL153C RAD53 protein protein Rad6p/Rad18p complex Affinity Capture-Western Reconstituted Complex YCR066W RAD18 protein protein YGL058W RAD6 protein protein RAVE complex Affinity Capture-Western YJR033C RAV1 protein protein YDR202C RAV2 protein protein YDR328C SKP1 protein protein RecQ helicase-Topo III complex Affinity Capture-Western Reconstituted Complex YLR234W TOP3 protein protein YMR190C SGS1 protein protein YPL024W RMI1 protein protein Reg1p/Glc7p complex Affinity Capture-Western Two-hybrid YER133W GLC7 protein protein YDR028C REG1 protein protein Reg2p/Glc7p complex Affinity Capture-Western Two-hybrid YER133W GLC7 protein protein YBR050C REG2 protein protein RENT complex Affinity Capture-Western YFR028C CDC14 protein protein YDL042C SIR2 protein protein YJL076W NET1 protein protein RES complex Affinity Capture-MS YGL174W BUD13 protein protein YIR005W IST3 protein protein YLR016C PML1 protein protein retromer complex Affinity Capture-Western Co-purification Reconstituted Complex YHR012W VPS29 protein protein YJL053W PEP8 protein protein YOR132W VPS17 protein protein YJL154C VPS35 protein protein YOR069W VPS5 protein protein ribonuclease H2 complex Affinity Capture-MS YLR154C RNH203 protein protein YDR279W RNH202 protein protein YNL072W RNH201 protein protein ribonuclease MRP complex Affinity Capture-MS YDR478W SNM1 protein protein YNL221C POP1 protein protein YHR062C RPP1 protein protein YNL282W POP3 protein protein YBR257W POP4 protein protein YLR145W RMP1 protein protein YAL033W POP5 protein protein YGR030C POP6 protein protein YBR167C POP7 protein protein YBL018C POP8 protein protein ribonucleoside-diphosphate reductase complex Reconstituted Complex YER070W RNR1 protein protein YJL026W RNR2 protein protein YGR180C RNR4 protein protein Ribosome-associated complex (RAC) Reconstituted Complex YGR285C ZUO1 protein protein YHR064C SSZ1 protein protein RING finger peroxin complex Affinity Capture-Western YJL210W PEX2 protein protein YMR026C PEX12 protein protein YDR265W PEX10 protein protein Rix1p complex Affinity Capture-MS YHR085W IPI1 protein protein YHR197W RIX1 protein protein YNL182C IPI3 protein protein RNA Degradation Complex Affinity Capture-MS YGL246C RAI1 protein protein YDR289C RTT103 protein protein YOR048C RAT1 protein protein RNA polymerase I transcription factor complex Affinity Capture-Western YML043C RRN11 protein protein YJL025W RRN7 protein protein YBL014C RRN6 protein protein RNA polymerase I upstream activating factor complex Affinity Capture-MS YOR295W UAF30 protein protein YLR141W RRN5 protein protein YMR270C RRN9 protein protein YBL025W RRN10 protein protein Rot2p/Gtb1p complex Affinity Capture-Western Co-purification YBR229C ROT2 protein protein YDR221W GTB1 protein protein Rpd3L complex Affinity Capture-MS YIL084C SDS3 protein protein YPL139C UME1 protein protein YMR263W SAP30 protein protein YNL097C PHO23 protein protein YDL076C RXT3 protein protein YPL181W CTI6 protein protein YBR095C RXT2 protein protein YKL185W ASH1 protein protein YDR207C UME6 protein protein YOL004W SIN3 protein protein YNL330C RPD3 protein protein YAL013W DEP1 protein protein Rpd3S complex Affinity Capture-MS YPL139C UME1 protein protein YPR023C EAF3 protein protein YMR075W RCO1 protein protein YOL004W SIN3 protein protein YNL330C RPD3 protein protein RSC complex Co-purification YCR020W-B HTL1 protein protein YGR275W RTT102 protein protein YLR321C SFH1 protein protein YMR033W ARP9 protein protein YPR034W ARP7 protein protein YIL126W STH1 protein protein YBL006C LDB7 protein protein YGR056W RSC1 protein protein YDR303C RSC3 protein protein YLR357W RSC2 protein protein YHR056C RSC30 protein protein YKR008W RSC4 protein protein YCR052W RSC6 protein protein YML127W RSC9 protein protein YFR037C RSC8 protein protein YMR091C NPL6 protein protein YLR033W RSC58 protein protein Rsp5p/Bul1 ubiquitin ligase complex Affinity Capture-Western Two-hybrid YMR275C BUL1 protein protein YER125W RSP5 protein protein Rsp5p/Bul2 ubiquitin ligase complex Affinity Capture-Western Two-hybrid YML111W BUL2 protein protein YER125W RSP5 protein protein Rtg1p/Rtg3p complex Reconstituted Complex YOL067C RTG1 protein protein YBL103C RTG3 protein protein Rtt109p/Vps75p complex Affinity Capture-Western YLL002W RTT109 protein protein YNL246W VPS75 protein protein Rvs161p/Rvs167p complex Affinity Capture-Western Two-hybrid YCR009C RVS161 protein protein YDR388W RVS167 protein protein Sac3p/Thp1p complex Affinity Capture-Western YDR159W SAC3 protein protein YOL072W THP1 protein protein SAGA complex Affinity Capture-MS YPL254W HFI1 protein protein YGL066W SGF73 protein protein YGL112C TAF6 protein protein YBR198C TAF5 protein protein YDR392W SPT3 protein protein YDR448W ADA2 protein protein YDR167W TAF10 protein protein YPL047W SGF11 protein protein YDR145W TAF12 protein protein YBR081C SPT7 protein protein YOL148C SPT20 protein protein YLR055C SPT8 protein protein YMR223W UBP8 protein protein YER164W CHD1 protein protein YMR236W TAF9 protein protein YCL010C SGF29 protein protein YBR111W-A SUS1 protein protein YDR176W NGG1 protein protein YHR099W TRA1 protein protein YGR252W GCN5 protein protein Sap155p/Sit4p complex Affinity Capture-Western YDL047W SIT4 protein protein YFR040W SAP155 protein protein Sap185p/Sit4p complex Affinity Capture-Western YDL047W SIT4 protein protein YJL098W SAP185 protein protein Sap190p/Sit4p complex Affinity Capture-Western YKR028W SAP190 protein protein YDL047W SIT4 protein protein SAS Complex Affinity Capture-MS YMR127C SAS2 protein protein YDR181C SAS4 protein protein YOR213C SAS5 protein protein SBF complex Co-purification YLR182W SWI6 protein protein YER111C SWI4 protein protein SCF-CDC4 complex Affinity Capture-Western Reconstituted Complex YDL132W CDC53 protein protein YFL009W CDC4 protein protein YOR057W SGT1 protein protein YDR328C SKP1 protein protein YDR054C CDC34 protein protein Sds22p/Glc7p complex Affinity Capture-MS YER133W GLC7 protein protein YKL193C SDS22 protein protein Sec61p translocon complex Co-purification YDR086C SSS1 protein protein YER087C-B SBH1 protein protein YLR378C SEC61 protein protein Sec62p/Sec63p complex Affinity Capture-Western YBR171W SEC66 protein protein YLR292C SEC72 protein protein YPL094C SEC62 protein protein YOR254C SEC63 protein protein serine C-palmitoyltransferase complex Biochemical Activity YMR296C LCB1 protein protein YDR062W LCB2 protein protein Set3p complex Affinity Capture-Western YIL112W HOS4 protein protein YOL068C HST1 protein protein YDR155C CPR1 protein protein YCR033W SNT1 protein protein YGL194C HOS2 protein protein YBR103W SIF2 protein protein YKR029C SET3 protein protein SF3b complex Affinity Capture-MS YML049C RSE1 protein protein YPR094W RDS3 protein protein YOR319W HSH49 protein protein YMR240C CUS1 protein protein YMR288W HSH155 protein protein YNL138W-A YSF3 protein protein Sfb3p/Sec23p complex Two-hybrid,Affinity Capture-Western YHR098C SFB3 protein protein YPR181C SEC23 protein protein Sgv1p/Bur2p complex Affinity Capture-Western Two-hybrid YPR161C SGV1 protein protein YLR226W BUR2 protein protein Shq1p/Naf1p complex Reconstituted Complex YNL124W NAF1 protein protein YIL104C SHQ1 protein protein signal peptidase complex Co-purification YML055W SPC2 protein protein YLR066W SPC3 protein protein YIR022W SEC11 protein protein YJR010C-A SPC1 protein protein Signal recognition particle (SRP) Co-purification YML105C SEC65 protein protein YDL092W SRP14 protein protein YPR088C SRP54 protein protein YKL122C SRP21 protein protein YPL243W SRP68 protein protein YPL210C SRP72 protein protein signal recognition particle receptor complex Affinity Capture-Western YKL154W SRP102 protein protein YDR292C SRP101 protein protein signalosome complex Co-purification Two-hybrid YDR179C CSN9 protein protein YDL216C RRI1 protein protein YOL117W RRI2 protein protein YMR025W CSI1 protein protein YJR084W CSN12 protein protein YIL071C PCI8 protein protein Ski Complex Affinity Capture-MS YLR398C SKI2 protein protein YPR189W SKI3 protein protein YGL213C SKI8 protein protein Sko1p/Cyc8p/Tup1 repressor complex Affinity Capture-Western YCR084C TUP1 protein protein YBR112C CYC8 protein protein YNL167C SKO1 protein protein Sli15p/Bir1p complex Two-hybrid YJR089W BIR1 protein protein YBR156C SLI15 protein protein SLIK (SAGA-like) complex Affinity Capture-Western Co-purification YPL254W HFI1 protein protein YGL066W SGF73 protein protein YGL112C TAF6 protein protein YBR198C TAF5 protein protein YDR392W SPT3 protein protein YDR448W ADA2 protein protein YDR167W TAF10 protein protein YDR145W TAF12 protein protein YBR081C SPT7 protein protein YOL148C SPT20 protein protein YGL252C RTG2 protein protein YER164W CHD1 protein protein YMR236W TAF9 protein protein YDR176W NGG1 protein protein YGR252W GCN5 protein protein YHR099W TRA1 protein protein Slx1p/Slx4p complex Co-purification YLR135W SLX4 protein protein YBR228W SLX1 protein protein Slx5p/Slx8p complex Biochemical Activity YDL013W SLX5 protein protein YER116C SLX8 protein protein smc5p-Smc6p complex Affinity Capture-MS Biochemical Activity YDR288W NSE3 protein protein YLR007W NSE1 protein protein YER038C KRE29 protein protein YDL105W NSE4 protein protein YML023C NSE5 protein protein YOL034W SMC5 protein protein YLR383W SMC6 protein protein YEL019C MMS21 protein protein SNARE complex Co-crystal Structure YAL030W SNC1 protein protein YPL232W SSO1 protein protein YGR009C SEC9 protein protein Snf1p/Snf4p/Gal83p complex Affinity Capture-Western YGL115W SNF4 protein protein YER027C GAL83 protein protein YDR477W SNF1 protein protein Snf1p/Snf4p/Sip1p complex Affinity Capture-Western YGL115W SNF4 protein protein YDR477W SNF1 protein protein YDR422C SIP1 protein protein Snf1p/Snf4p/Sip2p complex Affinity Capture-Western YGL208W SIP2 protein protein YGL115W SNF4 protein protein YDR477W SNF1 protein protein Sno1p/Snz1p complex Reconstituted Complex YMR096W SNZ1 protein protein YMR095C SNO1 protein protein Sod1p/Ccs1p complex Co-crystal Structure YMR038C CCS1 protein protein YJR104C SOD1 protein protein SPB components FRET YNL225C CNM67 protein protein YKL042W SPC42 protein protein YOR373W NUD1 protein protein YAL047C SPC72 protein protein YPL124W SPC29 protein protein YDR356W SPC110 protein protein YBR109C CMD1 protein protein Sro1p/Sec4p/Sec9p complex Affinity Capture-MS Affinity Capture-Western Reconstituted Complex YFL005W SEC4 protein protein YGR009C SEC9 protein protein YPR032W SRO7 protein protein Ssh1p translocon complex Affinity Capture-Western YDR086C SSS1 protein protein YER019C-A SBH2 protein protein YBR283C SSH1 protein protein STE5-MAPK complex Co-purification Two-hybrid YLR362W STE11 protein protein YDR103W STE5 protein protein YDL159W STE7 protein protein YBL016W FUS3 protein protein Succinate dehydrogenase complex (complex II) Biochemical Activity YKL141W SDH3 protein protein YDR178W SDH4 protein protein YKL148C SDH1 protein protein YLL041C SDH2 protein protein Succinyl-CoA ligase Biochemical Activity YOR142W LSC1 protein protein YGR244C LSC2 protein protein sulfite reductase complex (NADPH) Co-purification YFR030W MET10 protein protein YJR137C ECM17 protein protein Sum1p/Rfm1p/Hst1p complex Affinity Capture-Western YOL068C HST1 protein protein YDR310C SUM1 protein protein YOR279C RFM1 protein protein Sur1p/Csg2p complex Affinity Capture-Western YBR036C CSG2 protein protein YPL057C SUR1 protein protein Swh1p/Nvj1p complex Affinity Capture-Western Co-localization YAR042W SWH1 protein protein YHR195W NVJ1 protein protein SWI/SNF complex Affinity Capture-MS Affinity Capture-Western YGR275W RTT102 protein protein YBR289W SNF5 protein protein YHL025W SNF6 protein protein YMR033W ARP9 protein protein YPL129W TAF14 protein protein YPR034W ARP7 protein protein YNR023W SNF12 protein protein YFL049W SWP82 protein protein YOR290C SNF2 protein protein YJL176C SWI3 protein protein YDR073W SNF11 protein protein YPL016W SWI1 protein protein Swr1p complex Affinity Capture-MS Affinity Capture-Western YLR385C SWC7 protein protein YPL235W RVB2 protein protein YLR085C ARP6 protein protein YML041C VPS71 protein protein YJL081C ARP4 protein protein YGR002C SWC4 protein protein YAL011W SWC3 protein protein YDR485C VPS72 protein protein YBR231C SWC5 protein protein YDR190C RVB1 protein protein YFL039C ACT1 protein protein YNL107W YAF9 protein protein YDR334W SWR1 protein protein Synaptonemal complex (SC) Two-hybrid YDR285W ZIP1 protein protein YGL249W ZIP2 protein protein YLR263W RED1 protein protein YIL072W HOP1 protein protein Tap42p/Pph21p/Rrd2p complex Affinity Capture-Western YDL134C PPH21 protein protein YPL152W RRD2 protein protein YMR028W TAP42 protein protein Tap42p/Sit4p/Rrd1p complex Affinity Capture-Western YDL047W SIT4 protein protein YIL153W RRD1 protein protein YMR028W TAP42 protein protein Telomerase Affinity Capture-Western YLR233C EST1 protein protein YLR318W EST2 protein protein YIL009C-A EST3 protein protein THO complex Affinity Capture-Western YHR167W THP2 protein protein YNL139C RLR1 protein protein YML062C MFT1 protein protein YDR138W HPR1 protein protein Tim8p/Tim13p complex Reconstituted Complex YGR181W TIM13 protein protein YJR135W-A TIM8 protein protein Tof1p/Mrc1p/Csm3p complex Affinity Capture-MS YCL061C MRC1 protein protein YMR048W CSM3 protein protein YNL273W TOF1 protein protein TORC 1 complex Affinity Capture-MS Affinity Capture-Western YJR066W TOR1 protein protein YPL180W TCO89 protein protein YNL006W LST8 protein protein YHR186C KOG1 protein protein TORC 2 complex Affinity Capture-Western Reconstituted Complex YKL203C TOR2 protein protein YMR068W AVO2 protein protein YJL058C BIT61 protein protein YIL105C SLM1 protein protein YNL047C SLM2 protein protein YOL078W AVO1 protein protein YNL006W LST8 protein protein YER093C TSC11 protein protein TRAMP complex (Air1p) Affinity Capture-MS Affinity Capture-Western YJL050W MTR4 protein protein YIL079C AIR1 protein protein YOL115W PAP2 protein protein TRAMP complex (Air2p) Affinity Capture-MS Affinity Capture-Western YJL050W MTR4 protein protein YDL175C AIR2 protein protein YOL115W PAP2 protein protein transcription export complex Affinity Capture-Western YNL253W TEX1 protein protein YDR381W YRA1 protein protein YDL084W SUB2 protein protein transcription factor TFIIA complex Reconstituted Complex YKL058W TOA2 protein protein YOR194C TOA1 protein protein transcription factor TFIID complex Affinity Capture-MS YCR042C TAF2 protein protein YGR274C TAF1 protein protein YER148W SPT15 protein protein YMR005W TAF4 protein protein YPL011C TAF3 protein protein YGL112C TAF6 protein protein YBR198C TAF5 protein protein YML114C TAF8 protein protein YMR227C TAF7 protein protein YML015C TAF11 protein protein YDR167W TAF10 protein protein YML098W TAF13 protein protein YDR145W TAF12 protein protein YPL129W TAF14 protein protein YMR236W TAF9 protein protein transcription factor TFIIE complex Co-purification YKL028W TFA1 protein protein YKR062W TFA2 protein protein transcription factor TFIIF complex Affinity Capture-Western Reconstituted Complex Two-hybrid YPL129W TAF14 protein protein YGR186W TFG1 protein protein YGR005C TFG2 protein protein transcription factor TFIIH complex Affinity Capture-MS Affinity Capture-Western YPR025C CCL1 protein protein YLR005W SSL1 protein protein YIL143C SSL2 protein protein YER171W RAD3 protein protein YPR056W TFB4 protein protein YDL108W KIN28 protein protein YDR079C-A TFB5 protein protein YDR311W TFB1 protein protein YPL122C TFB2 protein protein YDR460W TFB3 protein protein transcription factor TFIIIB complex Reconstituted Complex YER148W SPT15 protein protein YGR246C BRF1 protein protein YNL039W BDP1 protein protein transcription factor TFIIIC complex Co-purification YAL001C TFC3 protein protein YGR047C TFC4 protein protein YBR123C TFC1 protein protein YOR110W TFC7 protein protein YPL007C TFC8 protein protein YDR362C TFC6 protein protein translation release factor complex Reconstituted Complex Two-hybrid YBR143C SUP45 protein protein YDR172W SUP35 protein protein TRAPP complex Affinity Capture-MS Affinity Capture-Western YGR166W KRE11 protein protein YDR407C TRS120 protein protein YDR472W TRS31 protein protein YKR068C BET3 protein protein YBR254C TRS20 protein protein YML077W BET5 protein protein YOR115C TRS33 protein protein YMR218C TRS130 protein protein YDR246W TRS23 protein protein YDR108W GSG1 protein protein tRNA Methyltransferase Complex Co-purification YDR165W TRM82 protein protein YDL201W TRM8 protein protein tRNA-intron endonuclease complex Affinity Capture-Western Two-hybrid YPL083C SEN54 protein protein YMR059W SEN15 protein protein YAR008W SEN34 protein protein YLR105C SEN2 protein protein Tubulins Two-hybrid YFL037W TUB2 protein protein YML085C TUB1 protein protein Tup1p/Ssn6p complex Affinity Capture-Western Reconstituted Complex YCR084C TUP1 protein protein YBR112C CYC8 protein protein U1 snRNP complex Affinity Capture-Western YBR119W MUD1 protein protein YLR298C YHC1 protein protein YGR074W SMD1 protein protein YOR159C SME1 protein protein YLR275W SMD2 protein protein YLR147C SMD3 protein protein YML046W PRP39 protein protein YER029C SMB1 protein protein YDR240C SNU56 protein protein YGR013W SNU71 protein protein YIL061C SNP1 protein protein YHR086W NAM8 protein protein YDR235W PRP42 protein protein YDL087C LUC7 protein protein YFL017W-A SMX2 protein protein YKL012W PRP40 protein protein YPR182W SMX3 protein protein U2 snRNP complex Affinity Capture-MS YML049C RSE1 protein protein YGR074W SMD1 protein protein YOR319W HSH49 protein protein YOR159C SME1 protein protein YNL286W CUS2 protein protein YMR240C CUS1 protein protein YLR275W SMD2 protein protein YLR147C SMD3 protein protein YPL213W LEA1 protein protein YER029C SMB1 protein protein YDL030W PRP9 protein protein YDL043C PRP11 protein protein YIR009W MSL1 protein protein YJL203W PRP21 protein protein YIR005W IST3 protein protein YMR288W HSH155 protein protein YFL017W-A SMX2 protein protein YPR182W SMX3 protein protein U4/U6 x U5 tri-snRNP complex Affinity Capture-MS YJR022W LSM8 protein protein YER172C BRR2 protein protein YGR074W SMD1 protein protein YDR378C LSM6 protein protein YNL147W LSM7 protein protein YEL026W SNU13 protein protein YGR006W PRP18 protein protein YLR275W SMD2 protein protein YBR152W SPP381 protein protein YGR075C PRP38 protein protein YLR147C SMD3 protein protein YER029C SMB1 protein protein YHR165C PRP8 protein protein YBR055C PRP6 protein protein YGR091W PRP31 protein protein YER146W LSM5 protein protein YER112W LSM4 protein protein YLR438C-A LSM3 protein protein YBL026W LSM2 protein protein YPR178W PRP4 protein protein YFL017W-A SMX2 protein protein YPR182W SMX3 protein protein YDR473C PRP3 protein protein YPR082C DIB1 protein protein YOR159C SME1 protein protein YKL173W SNU114 protein protein YDL098C SNU23 protein protein YOR308C SNU66 protein protein U5 snRNP complex Affinity Capture-MS YPR082C DIB1 protein protein YBL074C AAR2 protein protein YER172C BRR2 protein protein YGR074W SMD1 protein protein YOR159C SME1 protein protein YKL173W SNU114 protein protein YLR275W SMD2 protein protein YLR147C SMD3 protein protein YDR243C PRP28 protein protein YHR156C LIN1 protein protein YER029C SMB1 protein protein YHR165C PRP8 protein protein YFL017W-A SMX2 protein protein YPR182W SMX3 protein protein U6 snRNP complex Affinity Capture-MS YJR022W LSM8 protein protein YDR378C LSM6 protein protein YNL147W LSM7 protein protein YER146W LSM5 protein protein YER112W LSM4 protein protein YMR268C PRP24 protein protein YLR438C-A LSM3 protein protein YBL026W LSM2 protein protein Uba2p/Aos1p complex Reconstituted Complex YDR390C UBA2 protein protein YPR180W AOS1 protein protein ubiquitin conjugating enzyme complex Co-purification Reconstituted Complex YGL087C MMS2 protein protein YDR092W UBC13 protein protein ubiquitin ligase ERAD-L complex Affinity Capture-MS YLR207W HRD3 protein protein YML029W USA1 protein protein YBR201W DER1 protein protein YDR057W YOS9 protein protein YOL013C HRD1 protein protein ubiquitin ligase ERAD-M complex Affinity Capture-MS YLR207W HRD3 protein protein YOL013C HRD1 protein protein Ubp3p/Bre5p complex Affinity Capture-Western Reconstituted Complex Two-hybrid YER151C UBP3 protein protein YNR051C BRE5 protein protein UDP-N-acetylglucosamine transferase complex Co-purification YGL047W ALG13 protein protein YBR070C ALG14 protein protein Ula1p/Uba3p complex Reconstituted Complex YPL003W ULA1 protein protein YPR066W UBA3 protein protein Ume6p/Ime1p complex Two-hybrid YJR094C IME1 protein protein YDR207C UME6 protein protein UTP A complex Affinity Capture-MS YDR324C UTP4 protein protein YGR128C UTP8 protein protein YEL055C POL5 protein protein YMR093W UTP15 protein protein YHR196W UTP9 protein protein YJL109C UTP10 protein protein YPL126W NAN1 protein protein UTP B complex Affinity Capture-MS YLR409C UTP21 protein protein YJL069C UTP18 protein protein YDR449C UTP6 protein protein YLR129W DIP2 protein protein YLR222C UTP13 protein protein YCR057C PWP2 protein protein UTP C complex Affinity Capture-MS YGR090W UTP22 protein protein YCL031C RRP7 protein protein YOR061W CKA2 protein protein YIL035C CKA1 protein protein YGL019W CKB1 protein protein YOR039W CKB2 protein protein Vam3p/Vam7 vacuolar tSNARE complex Affinity Capture-Western YOR106W VAM3 protein protein YGL212W VAM7 protein protein VTC heterotetrameric complex Affinity Capture-MS YFL004W VTC2 protein protein YER072W VTC1 protein protein YJL012C VTC4 protein protein YPL019C VTC3 protein protein zeta DNA polymerase complex Affinity Capture-Western YIL139C REV7 protein protein YPL167C REV3 protein protein