| 1,3-beta-glucan synthase complex (Fks1p/Rho1p) |
| 1,3-beta-glucan synthase complex (Gsc2p/Smk1p) |
| 19/22S regulator |
| 20S proteasome |
| 6-phosphofructokinase complex |
| acetolactate synthase complex |
| actin cytoskeleton-regulatory complex, Pan1p/Sla1p/End3p complex |
| Ada2p/Gcn5p/Ada3 transcription activator complex |
| adenylyl cyclase complex |
| adoMet-dependent tRNA methyltransferase (Mtase) Complex |
| alpha DNA polymerase:primase complex |
| alpha,alpha-trehalose-phosphate synthase complex (UDP-forming) |
| alpha-1,6-mannosyltransferase complex(Anp1p/Mnn9p) |
| alpha-1,6-mannosyltransferase complex(Van1p/Mnn9p) |
| anaphase-promoting complex |
| anthranilate synthase complex |
| AP-1 adaptor complex |
| AP-2 adaptor complex |
| AP-3 adaptor complex |
| Apg12p/Apg5p/Apg16 multimeric complex |
| Arg2p/Arg5,6p complex |
| ARGR complex |
| Arp2/3 protein complex |
| Atg20p/Snx4p/Snx41p complex |
| Aurora B-INCENP protein kinase complex |
| Bi3 ribonucleoprotein complex |
| Bi4p/Nam2p complex |
| Bni4p/Glc7p complex |
| box C/D snoRNP complex |
| Bub1p/Bub3p complex |
| Bub2p/Bfa1p complex |
| Bud14p/Glc7p complex |
| CAAX-protein geranylgeranyltransferase complex |
| calcineurin complex |
| cAMP-dependent protein kinase |
| Car1p/Arg3p complex |
| carbamoyl-phosphate synthase complex |
| carboxy-terminal domain protein kinase complex |
| Cbf1p/Met4p/Met28p complex |
| CBF3 complex |
| Cbp1p/Pet309p complex |
| CCAAT-binding factor complex |
| CCR4-NOT core complex |
| Cdc24p/Far1p/Gbetagamma protein complex |
| Cdc28p/Clb1p complex |
| Cdc28p/Clb2p complex |
| Cdc28p/Clb3p complex |
| Cdc28p/Clb4p complex |
| Cdc28p/Clb5p complex |
| Cdc28p/Clb6p complex |
| Cdc28p/Cln1p complex |
| Cdc28p/Cln2p complex |
| Cdc28p/Cln3p complex |
| Cdc42p/Ste20p complex |
| Cdc48p complex |
| Cdc73p/Paf1p complex |
| Cdc7p/Dbf4p complex |
| chaperonin-containing T-complex |
| chromatin accessibility complex |
| chromatin assembly complex |
| chromatin silencing complex |
| Chs5p/Arf-1binding proteins (ChAPs) |
| Chz1p/Htz1p/Htb1p complex |
| Clathrin |
| cohesin loading factor complex |
| COMA complex |
| commitment complex |
| COMPASS complex |
| COPI |
| COPII |
| CORVET complex |
| Cox14p/Cox1p/Mss51p complex |
| Csh1p/Csg2p complex |
| Csm1p/Lrs4p complex |
| Ctf3p protein complex |
| Cul3p-RING ubiquitin ligase complex |
| CURI complex |
| Cytochrome bc1 complex (Ubiquinol-cytochrome c reductase complex, complex III) |
| Cytochrome c oxidase (complex IV) |
| cytoplasmic dynein complex |
| Cytoplasmic exosome complex |
| cytoplasmic ribosomal large subunit |
| cytoplasmic ribosomal small subunit |
| DASH complex |
| Dcs1p/Dcs2 heterodimer |
| Decapping Enzyme Complex |
| Def1p/Rad26p complex |
| degradosome |
| Dig1p/Ste12p/Dig2p complex |
| DNA ligase IV |
| DNA polymerase delta complex |
| DNA polymerase epsilon complex |
| DNA replication factor A complex |
| DNA replication factor C complex (Ctf18p/Ctf8p/dcc1p) |
| DNA replication factor C complex (Elg1p) |
| DNA replication factor C complex (Rad24p) |
| DNA replication factor C complex (Rcf1p) |
| DNA-directed RNA polymerase I complex |
| DNA-directed RNA polymerase II complex |
| DNA-directed RNA polymerase III complex |
| Dop1p/Mon2p complex |
| Dpb11p/Sld2p complex |
| DSIF complex |
| Dsl1p complex |
| dynactin complex |
| eEF1 |
| EGO complex |
| eIF1/eIF1A/40S complex |
| eIF2 |
| eIF2B |
| eIF3 |
| eIF4F |
| Eisosome |
| EKC/KEOPS protein complex |
| Ela1p/Elc1p complex |
| Elongator complex |
| ER V-ATPase assembly complex |
| Erv41p/Erv46p complex |
| ESCRT I complex |
| ESCRT II complex |
| ESCRT III complex |
| Esp1p/Pds1p complex |
| Exocyst complex |
| F0/F1 ATP synthase (complex V) |
| FACT complex |
| Far3p/Far7p/Far8p/Far9p/Far10p/Far11p complex |
| Fatty Acid Import Complex |
| fatty acid synthase complex |
| FBP degradation complex |
| Fig4p/Vac14p complex |
| Fth1p/Fet5p complex |
| Gac1p/Glc7p complex |
| GAL3p/GAL80p complex |
| GAL4p/GAL80p complex |
| gamma-tubulin complex |
| GARP complex |
| Gcd10p/Gcd14p complex |
| Gcn1p/Gcn20p complex |
| GCR complex |
| Geranylgeranyltransferase II (GGTase II) |
| GET complex |
| GINS complex |
| Gip1p/Glc7p complex |
| glycine cleavage complex |
| glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex |
| Golgi transport complex |
| GPI-anchor transamidase complex |
| Grh1p/Bug1p complex |
| GSE Complex |
| GSH degradosomal complex |
| guanyl-nucleotide exchange factor complex |
| Gyl1p/Gyp5p complex |
| H+-transporting ATPase, Golgi |
| H+-transporting ATPase, vacuolar |
| HAT-B complex |
| heterodimeric G-protein complex |
| heterotrimeric G-protein complex |
| HIR complex |
| histone deacetylase complex |
| histone H2A phosphatase complex |
| HMC Complex |
| Holliday junction resolvase complex |
| Hop2p/Mnd1p complex |
| HOPS complex |
| Hse1p/Vps27p complex |
| Hym1p/Kic1p/Sog2p complex |
| i-AAA complex |
| Ino2p/Ino4p basic helix-loop-helix heteromeric complex |
| Ino80p complex |
| Isocitrate dehydrogenase |
| ISW1a complex |
| ISW1b complex |
| karyopherin docking subcomplex of the Nuclear Pore Complex (NPC) |
| Kel1p/Kel2p complex |
| Kel1p/Kel2p/Lte1p complex |
| Kornberg's mediator (SRB) complex |
| Ku complex |
| Lge1p/Bre1p complex |
| LMA1 complex |
| luminal surveillance complex |
| m-AAA complex |
| Mad1p/Mad2p complex |
| MBF complex |
| Mcm2-7 complex |
| Mdm12p/Mmm1p/Mdm10p complex |
| Mei5p/Sae3p complex |
| meiotic recombination initiation complex |
| Met4p/Met28p/Met31p complex |
| Met4p/Met28p/Met32p complex |
| methionyl glutamyl tRNA synthetase complex |
| Mgm1p/Ugo1p/Fzo1p complex |
| MIND complex |
| mitochondrial ATPase inhibitor complex |
| mitochondrial inner membrane peptidase complex |
| mitochondrial inner membrane presequence translocase complex |
| mitochondrial inner membrane protein insertion complex |
| mitochondrial intermembrane space protein transporter complex |
| mitochondrial outer membrane translocase complex |
| mitochondrial oxoglutarate dehydrogenase complex |
| mitochondrial processing peptidase complex |
| mitochondrial pyruvate dehydrogenase complex |
| mitochondrial ribosomal large subunit |
| mitochondrial ribosomal small subunit |
| mitochondrial sorting and assembly machinery complex |
| mitotic checkpoint complex |
| Mks1p/Rtg2p complex |
| Mlh1p/Mlh2p complex |
| Mlh1p/Mlh3p complex |
| Mlh1p/Pms1p complex |
| Mob1p/Dbf2p complex |
| Mob2p/Cbk1p complex |
| Mon1p/Ccz1p complex |
| monopolin complex |
| Mot1p complex |
| Mps2p/Bbp1p complex |
| mRNA cleavage and polyadenylation specificity factor complex |
| mRNA cleavage factor complex (CFI) |
| mRNA guanylyl transferase (capping complex) |
| MRX complex |
| MSH2p/MSH3p complex |
| MSH2p/MSH6p complex |
| Mst27p/Mst28p complex |
| Mtk1p/Pbp1p complex |
| Mto1p/Mss1p complex |
| Mtr2p/Mex67p complex |
| multi-eIF complex |
| nascent polypeptide-associated complex |
| NatA complex |
| NatB complex |
| NatC complex |
| NC2 complex |
| Ndc80p complex |
| Nem1p/Spo7p complex |
| Nfs1p/Isd11p complex |
| Noc1p/Noc2p complex |
| Noc2p/Noc3p complex |
| Noc4p/Nop14p complex |
| Nonsense-mediated mRNA decay pathway complex |
| Npa2p-containing subcomplex |
| Nsp1p complex |
| Nsp1p/Nup82p complex |
| Ntr1p/Ntr2p/Prp43p complex |
| NuA3 histone acetyltransferase complex |
| NuA4 histone acetyltransferase complex |
| nuclear cohesin complex |
| nuclear condensin complex |
| Nuclear exosome complex |
| nuclear ubiquitin ligase complex |
| nucleolar ribonuclease P complex |
| Nucleosomal protein complex |
| nucleotide-excision repair factor 1 complex |
| nucleotide-excision repair factor 2 complex |
| nucleotide-excision repair factor 3 complex |
| nucleotide-excision repair factor 4 complex |
| Nup82 nuclear pore subcomplex |
| Nup84p complex |
| OAF complex |
| OCA complex |
| oligosaccharyl transferase complex |
| Origin recognition complex |
| other DNA repair complexes |
| palmitoyltransferase complex |
| PAM complex |
| PAN complex |
| Permease-Oxidase Complex |
| peroxin docking complex |
| Phenylalaninine-tRNA-ligase |
| Pho85p/Pcl10p complex |
| Pho85p/Pcl1p complex |
| Pho85p/Pcl2p complex |
| Pho85p/Pcl8p complex |
| Pho85p/Pho80p complex |
| phosphatidylinositol (PtdIns) 3-kinase complex (functions in autophagy) |
| phosphatidylinositol (PtdIns) 3-kinase complex (functions in CPY sorting) |
| Png1p/Rad23p complex |
| polarisome complex |
| Polzeta-Rev1p complex |
| prefoldin complex |
| prohibitin complex |
| protein farnesyltransferase complex |
| protein kinase CK2 complex |
| Protein O-mannosyltransferase(Pmt1p/Pmt2p) |
| Protein O-mannosyltransferase(Pmt3p/Pmt5p) |
| protein phosphatase type 2A complex (Cdc55p) |
| protein phosphatase type 2A complex (Rts1p) |
| Prp19-associated complex |
| Prp9p/Prp11p/Prp21p complex(SF3a complex) |
| Psr1p/Whi2p complex |
| Pxa1p/Pxa2p complex |
| Q-biosynthetic Coq polypeptide complex |
| Rad17p/Ddc1p/Mec3p complex |
| Rad53p/Asf1p complex |
| Rad6p/Rad18p complex |
| RAVE complex |
| RecQ helicase-Topo III complex |
| Reg1p/Glc7p complex |
| Reg2p/Glc7p complex |
| RENT complex |
| RES complex |
| retromer complex |
| ribonuclease H2 complex |
| ribonuclease MRP complex |
| ribonucleoside-diphosphate reductase complex |
| Ribosome-associated complex (RAC) |
| RING finger peroxin complex |
| Rix1p complex |
| RNA Degradation Complex |
| RNA polymerase I transcription factor complex |
| RNA polymerase I upstream activating factor complex |
| Rot2p/Gtb1p complex |
| Rpd3L complex |
| Rpd3S complex |
| RSC complex |
| Rsp5p/Bul1 ubiquitin ligase complex |
| Rsp5p/Bul2 ubiquitin ligase complex |
| Rtg1p/Rtg3p complex |
| Rtt109p/Vps75p complex |
| Rvs161p/Rvs167p complex |
| Sac3p/Thp1p complex |
| SAGA complex |
| Sap155p/Sit4p complex |
| Sap185p/Sit4p complex |
| Sap190p/Sit4p complex |
| SAS Complex |
| SBF complex |
| SCF-CDC4 complex |
| Sds22p/Glc7p complex |
| Sec61p translocon complex |
| Sec62p/Sec63p complex |
| serine C-palmitoyltransferase complex |
| Set3p complex |
| SF3b complex |
| Sfb3p/Sec23p complex |
| Sgv1p/Bur2p complex |
| Shq1p/Naf1p complex |
| signal peptidase complex |
| Signal recognition particle (SRP) |
| signal recognition particle receptor complex |
| signalosome complex |
| Ski Complex |
| Sko1p/Cyc8p/Tup1 repressor complex |
| Sli15p/Bir1p complex |
| SLIK (SAGA-like) complex |
| Slx1p/Slx4p complex |
| Slx5p/Slx8p complex |
| smc5p-Smc6p complex |
| SNARE complex |
| Snf1p/Snf4p/Gal83p complex |
| Snf1p/Snf4p/Sip1p complex |
| Snf1p/Snf4p/Sip2p complex |
| Sno1p/Snz1p complex |
| Sod1p/Ccs1p complex |
| SPB components |
| Sro1p/Sec4p/Sec9p complex |
| Ssh1p translocon complex |
| STE5-MAPK complex |
| Succinate dehydrogenase complex (complex II) |
| Succinyl-CoA ligase |
| sulfite reductase complex (NADPH) |
| Sum1p/Rfm1p/Hst1p complex |
| Sur1p/Csg2p complex |
| Swh1p/Nvj1p complex |
| SWI/SNF complex |
| Swr1p complex |
| Synaptonemal complex (SC) |
| Tap42p/Pph21p/Rrd2p complex |
| Tap42p/Sit4p/Rrd1p complex |
| Telomerase |
| THO complex |
| Tim8p/Tim13p complex |
| Tof1p/Mrc1p/Csm3p complex |
| TORC 1 complex |
| TORC 2 complex |
| TRAMP complex (Air1p) |
| TRAMP complex (Air2p) |
| transcription export complex |
| transcription factor TFIIA complex |
| transcription factor TFIID complex |
| transcription factor TFIIE complex |
| transcription factor TFIIF complex |
| transcription factor TFIIH complex |
| transcription factor TFIIIB complex |
| transcription factor TFIIIC complex |
| translation release factor complex |
| TRAPP complex |
| tRNA Methyltransferase Complex |
| tRNA-intron endonuclease complex |
| Tubulins |
| Tup1p/Ssn6p complex |
| U1 snRNP complex |
| U2 snRNP complex |
| U4/U6 x U5 tri-snRNP complex |
| U5 snRNP complex |
| U6 snRNP complex |
| Uba2p/Aos1p complex |
| ubiquitin conjugating enzyme complex |
| ubiquitin ligase ERAD-L complex |
| ubiquitin ligase ERAD-M complex |
| Ubp3p/Bre5p complex |
| UDP-N-acetylglucosamine transferase complex |
| Ula1p/Uba3p complex |
| Ume6p/Ime1p complex |
| UTP A complex |
| UTP B complex |
| UTP C complex |
| Vam3p/Vam7 vacuolar tSNARE complex |
| VTC heterotetrameric complex |
| zeta DNA polymerase complex |
